Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3460 |
Symbol | |
ID | 4069036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4081315 |
End bp | 4082580 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637985482 |
Product | major facilitator transporter |
Protein accession | YP_592535 |
Protein GI | 94970487 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0454626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00919031 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTCCG GCTCGCGCGC TGCCTTCCAA TATCCTGCGT TCCGCTACTT CCAGATGGCG CGTTTCCTCG TCGTTTCGGC GATGGAGATG CAGTCGGTCG CGGTGGGCTG GCAGGTGTAC GAGATCACCC GGCGACCGTT GGACCTTGGG CTCGTGGGGC TCGCGCAATT CTTGCCTGGA ATTTTGTTGT TCCTTCTCGC CGGACATACG GCAGATCGTC TTCCGAGACA TCGCATCGTA GCCAGGTGTT ATGCGGCTTT CGCTTTGTGT TCGGCACTCC TTTTGATGTT CACAGCCCGT GGCTTGCACA ACGTGCGCCC CATCTATGTC GTACTGGTGC TGATCGGAAT CGTGCGCGCG TTCAACGGAC CGGCTGGGCA GTCGCTCATG CCGCAGTTGG TCTCGGCGGA AGATTTTCCG AATGCTGCGG CGTGGGGATC TTCGATCTTC AATACCGCGA CCATCCTCGG TCCGGCGCTG GGCGGATTGC TCTACGGCAT TACCGGACCA AAGAATGTTT ACCTCATCGC GACAATCTCG TTCGTCTTTG CGTTTGTCTC CGCGTTGTTC ATCACAGTGC AGAGCGCGCA GCGGCCGCGC GGGACGGCGT CGTTGCGAAC TGTTCTGGCG GGCTTCGACT ACCTTTGGCA CAACCAGATC GTGCTGGGCG CGATCTCGCT CGATCTGTTC GCGGTTTTGT TGGGGGGAGC GGTCGCGTTG CTGCCGGTGT ATGCGCGAGA GATCCTGCGC GTGGGACCGT GGGGATTGGG TATTCTGCGT AGCGCGCCGG GAGTCGGTGC GGTGCTGATG GCGCTGGTGC TGGCGCATCG TCCGCTGCGA AAGAGAGCGG GCGCGGTGAT GCTGTGGTGC GTAGCGATCT TCGGCGTGGC GACGATCGTG TTCGGATTGT CGCGCTCGGT GATGCTCTCG CTGATCACGC TACTCACTGT CGGCGCCAGC GACATGGTGA GCGTGATCGT GCGTTCGACG CTGGTGCAAC TCAACACGCC CGACGAAATG CGCGGTCGCG TGAGTGCGGT GAACATGTTG TTCATTGGTG CGTCGAACGA GTTCGGACAA TTCGAAAGCG GCATCACCGC GCAGTGGCTG GGAACTGTCC CCGCGGTGGT GTGGGGCGGC GTCGGAACAC TGGTCGTGGT GGCGGTTTGG AGCGTATTGT TCCCGAGGTT GCGGCGCGTG GATTCGCTGA CCGAGCAACC GAATATGCTT CCGGCAGAGC CGGCGGTCAC GGCTGATCCT AACTGA
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Protein sequence | MASGSRAAFQ YPAFRYFQMA RFLVVSAMEM QSVAVGWQVY EITRRPLDLG LVGLAQFLPG ILLFLLAGHT ADRLPRHRIV ARCYAAFALC SALLLMFTAR GLHNVRPIYV VLVLIGIVRA FNGPAGQSLM PQLVSAEDFP NAAAWGSSIF NTATILGPAL GGLLYGITGP KNVYLIATIS FVFAFVSALF ITVQSAQRPR GTASLRTVLA GFDYLWHNQI VLGAISLDLF AVLLGGAVAL LPVYAREILR VGPWGLGILR SAPGVGAVLM ALVLAHRPLR KRAGAVMLWC VAIFGVATIV FGLSRSVMLS LITLLTVGAS DMVSVIVRST LVQLNTPDEM RGRVSAVNML FIGASNEFGQ FESGITAQWL GTVPAVVWGG VGTLVVVAVW SVLFPRLRRV DSLTEQPNML PAEPAVTADP N
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