Gene Acid345_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3460 
Symbol 
ID4069036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4081315 
End bp4082580 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content61% 
IMG OID637985482 
Productmajor facilitator transporter 
Protein accessionYP_592535 
Protein GI94970487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0454626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00919031 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCCG GCTCGCGCGC TGCCTTCCAA TATCCTGCGT TCCGCTACTT CCAGATGGCG 
CGTTTCCTCG TCGTTTCGGC GATGGAGATG CAGTCGGTCG CGGTGGGCTG GCAGGTGTAC
GAGATCACCC GGCGACCGTT GGACCTTGGG CTCGTGGGGC TCGCGCAATT CTTGCCTGGA
ATTTTGTTGT TCCTTCTCGC CGGACATACG GCAGATCGTC TTCCGAGACA TCGCATCGTA
GCCAGGTGTT ATGCGGCTTT CGCTTTGTGT TCGGCACTCC TTTTGATGTT CACAGCCCGT
GGCTTGCACA ACGTGCGCCC CATCTATGTC GTACTGGTGC TGATCGGAAT CGTGCGCGCG
TTCAACGGAC CGGCTGGGCA GTCGCTCATG CCGCAGTTGG TCTCGGCGGA AGATTTTCCG
AATGCTGCGG CGTGGGGATC TTCGATCTTC AATACCGCGA CCATCCTCGG TCCGGCGCTG
GGCGGATTGC TCTACGGCAT TACCGGACCA AAGAATGTTT ACCTCATCGC GACAATCTCG
TTCGTCTTTG CGTTTGTCTC CGCGTTGTTC ATCACAGTGC AGAGCGCGCA GCGGCCGCGC
GGGACGGCGT CGTTGCGAAC TGTTCTGGCG GGCTTCGACT ACCTTTGGCA CAACCAGATC
GTGCTGGGCG CGATCTCGCT CGATCTGTTC GCGGTTTTGT TGGGGGGAGC GGTCGCGTTG
CTGCCGGTGT ATGCGCGAGA GATCCTGCGC GTGGGACCGT GGGGATTGGG TATTCTGCGT
AGCGCGCCGG GAGTCGGTGC GGTGCTGATG GCGCTGGTGC TGGCGCATCG TCCGCTGCGA
AAGAGAGCGG GCGCGGTGAT GCTGTGGTGC GTAGCGATCT TCGGCGTGGC GACGATCGTG
TTCGGATTGT CGCGCTCGGT GATGCTCTCG CTGATCACGC TACTCACTGT CGGCGCCAGC
GACATGGTGA GCGTGATCGT GCGTTCGACG CTGGTGCAAC TCAACACGCC CGACGAAATG
CGCGGTCGCG TGAGTGCGGT GAACATGTTG TTCATTGGTG CGTCGAACGA GTTCGGACAA
TTCGAAAGCG GCATCACCGC GCAGTGGCTG GGAACTGTCC CCGCGGTGGT GTGGGGCGGC
GTCGGAACAC TGGTCGTGGT GGCGGTTTGG AGCGTATTGT TCCCGAGGTT GCGGCGCGTG
GATTCGCTGA CCGAGCAACC GAATATGCTT CCGGCAGAGC CGGCGGTCAC GGCTGATCCT
AACTGA
 
Protein sequence
MASGSRAAFQ YPAFRYFQMA RFLVVSAMEM QSVAVGWQVY EITRRPLDLG LVGLAQFLPG 
ILLFLLAGHT ADRLPRHRIV ARCYAAFALC SALLLMFTAR GLHNVRPIYV VLVLIGIVRA
FNGPAGQSLM PQLVSAEDFP NAAAWGSSIF NTATILGPAL GGLLYGITGP KNVYLIATIS
FVFAFVSALF ITVQSAQRPR GTASLRTVLA GFDYLWHNQI VLGAISLDLF AVLLGGAVAL
LPVYAREILR VGPWGLGILR SAPGVGAVLM ALVLAHRPLR KRAGAVMLWC VAIFGVATIV
FGLSRSVMLS LITLLTVGAS DMVSVIVRST LVQLNTPDEM RGRVSAVNML FIGASNEFGQ
FESGITAQWL GTVPAVVWGG VGTLVVVAVW SVLFPRLRRV DSLTEQPNML PAEPAVTADP
N