| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3459 |
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| Symbol | |
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| ID | 4069035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4078739 |
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| End bp | 4081192 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985481 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592534 |
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| Protein GI | 94970486 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0129037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC TACTGCAGGA CATTCGTTAC GGCGTGCGCA TGTTGCGCAA GAGTCCGGCC
TTCACCTTGA TTGCGGTGCT GACGCTGGCG CTGGGCATCG GCGCGAACAC CGCGCTGTTT
TCCGTGGTGA ACGGGGTGCT GCTCAACCCG CTGCCGTATC CGCATCCGGA CCAGTTGGTC
GTGCTGCACG CAGGGAAGCC GAACTTCGCG TTCGGGTCCA TTTCGTACCC GAACTTTGTT
GATTGGCAGA AGAACAACCA CACGTTCTCC GCGATCGCTG CTTATCGCTC CCTGGTATTC
AACCTCACGG GCTCGGGAGA TGCAGAACAA CTCTTTGGCG AGTATGTGAC GTCGGATTTC
TTCCCGATCC TCGGCACCAA GCCGGTGATC GGGCGCAGCT TCCTGAAAGA CGAAGATCGC
ATTGGCGGGC CGCCATTGGT GATGATCAGC GCGGGGTTGT GGCGTAAAAA GTTTGCGTCA
TCTCCCGACG TGTTGAGCAA GCCGATCACC CTGAATGGCG CGCAGTACAC CGTCATTGGC
GTGGTGCCCG CGGACTTCAG CCTGCCGCTT GGGAACTTTC AGGCCTCTGA CCTCTACATC
CCCATGGGAC AGTTCGACAA GACGGCGCTG CAACACCGCG ACTGGGGACT TGGTATTCAC
GGGATTGGGC GGCTCAAGCC CGGCGTGACC CTGGCCGAGG CCAAGGCCGA CATGGAAGCG
GTGTCCCGCG ATCTCGCATT GGCTTATCCG GAGTTCAATA AAGATACGAC TGCGAAGGTC
CGCCCACTGC GCGACCAGGT TGTTGGCTAC GTTCGTCCTT ACCTGATCAC GCTGCTGGCG
GCGGTGGGAT TCGTGCTGCT CATCGCTTGC GTGAATGTGG CGAACCTGGT GCTCGCGCGG
TCGGTAGGAC GCACGCGCGA GTTCGCGATC CGGGCCGCGC TGGGTGCAGC GCGCGGGCGC
GTTGTGAGGC AGATGCTCAC CGAGAGCCTG ATGCTCTCGA TCGTTGGCGG CGTGTTGGGC
GTTTTGTTCG CGGGCTATGG CACGCACGCA GCGCTGGCGG CGTTGCCGAG AGTTCTGCCG
AGGTCGGAAA CCATCTCGGT GGACGGACGC GTATTGATAT TTACCGCTGC GCTGATCGTA
ATCACCGGAA TGCTTGCGGG AATCATTCCG GCGCTGTCTC GTAACGCGCA TACCGATTTG
AGCGACACGC TGAAGGCGAC GGGACGAACC GTGACGAGTG CGCGGCATCG CGTGCAGAAC
GTGTTCGTGG TGGCACAGAT GGCGCTGGCC ATGGTGCTGC TGATCGGTGC TGGCCTGATG
GTGCGCACGC TGGTGTACCT GTGGCACGTG GATCCTGGGT TCAATCCACA AAACATTGTG
ACGTTCGGGA TGTCGTTCCC GGCAGCGCTG AACACGGCGG ACCCGGAAAC GATCCGCCAG
CAATACCACC AACTTGAAGA TCAGCTCGTG ACGTTGCCAG GAATCAAAGA CGTTTCCTTC
CTCTGGGGTG CGCTTCCCCT TGGGGACGAT GACGAGACTT ACTTCTGGGT GGACGGCCGG
CCGAAGCCAT CTCAAAACGA TATGCCGATG GCCATCAATT ACATCGTGAG CCCGAGCTAT
CTGCAGGCGA TGTCGATTCC ATTGCAGAGC GGGCGATTTT TCACGCGCCA GGATGATGAA
CACGCGCCGA GCGTGGTGGT GATTGACACG ACATTCGCGC GAAAGTTCTA CCCGAATGAA
GATCCGATCG GGAAGAGACT GCATATGCAG GACGAGCGCG TGGTCGAAAT CATCGGCGTG
GTCGGGCACG TGAAGCAGTG GAGCCTCGAC AACGATTCGC AAATCTCTCC GCTGCAGGAG
CAGTTCTACT TCCCGTGGGC GCAAGTCTCG GACCAGTACA CGAAGTCGTA TGGGTCGGGA
TCATTCACCA TGGCTCGCGG TATCGGTGGT GATGCGCAGG TCATGAGCAC ACTTCGCACG
GCAGTGAGGC AGATTTCGAG CGAGATGGTA ATTGCCAATT CGGAATCCAT GAGCGCGATT
GTCGCGGATT CGTTTGCATC GCGTCGCTTT ACGATGATCC TGCTTTCCAT CTTCGCGGGG
CTCGCGCTGC TGCTGGCGAG CATCGGAATT TATGGCGTGA TTGCGTATGC AGTCGGCCAG
CGCACCCAGG AGATTGGCGT ACGCATTGCG CTGGGCGCGG AGCGCTTCGA CATCCTGCGC
ATGGTGCTGT CGAGCGGCGG AAGATTGCTG GCGATTGGTA TTGGCGTGGG GATGGTAGCG
GCACTGGGGT TGACACGATT GATGTCGAGC CAACTGTCGG GAGTCAAGCC TACCGATCCG
CTGACGTTCG TGGCGGTGGG AGCGCTACTC GCGATGGTGG CGTTGTTGGC GTGTTATGTG
CCGGCGCGAC GGGCGAGCAA GGTGGATCCG ATGGTCGCGC TGCGGTACGA CTAA
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| Protein sequence | MNTLLQDIRY GVRMLRKSPA FTLIAVLTLA LGIGANTALF SVVNGVLLNP LPYPHPDQLV
VLHAGKPNFA FGSISYPNFV DWQKNNHTFS AIAAYRSLVF NLTGSGDAEQ LFGEYVTSDF
FPILGTKPVI GRSFLKDEDR IGGPPLVMIS AGLWRKKFAS SPDVLSKPIT LNGAQYTVIG
VVPADFSLPL GNFQASDLYI PMGQFDKTAL QHRDWGLGIH GIGRLKPGVT LAEAKADMEA
VSRDLALAYP EFNKDTTAKV RPLRDQVVGY VRPYLITLLA AVGFVLLIAC VNVANLVLAR
SVGRTREFAI RAALGAARGR VVRQMLTESL MLSIVGGVLG VLFAGYGTHA ALAALPRVLP
RSETISVDGR VLIFTAALIV ITGMLAGIIP ALSRNAHTDL SDTLKATGRT VTSARHRVQN
VFVVAQMALA MVLLIGAGLM VRTLVYLWHV DPGFNPQNIV TFGMSFPAAL NTADPETIRQ
QYHQLEDQLV TLPGIKDVSF LWGALPLGDD DETYFWVDGR PKPSQNDMPM AINYIVSPSY
LQAMSIPLQS GRFFTRQDDE HAPSVVVIDT TFARKFYPNE DPIGKRLHMQ DERVVEIIGV
VGHVKQWSLD NDSQISPLQE QFYFPWAQVS DQYTKSYGSG SFTMARGIGG DAQVMSTLRT
AVRQISSEMV IANSESMSAI VADSFASRRF TMILLSIFAG LALLLASIGI YGVIAYAVGQ
RTQEIGVRIA LGAERFDILR MVLSSGGRLL AIGIGVGMVA ALGLTRLMSS QLSGVKPTDP
LTFVAVGALL AMVALLACYV PARRASKVDP MVALRYD
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