Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3099 |
Symbol | |
ID | 4072663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3683398 |
End bp | 3684105 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985118 |
Product | two component transcriptional regulator |
Protein accession | YP_592174 |
Protein GI | 94970126 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.663462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAATCGC GCGGAACGAA GAGGTTCGGA GTGCGTCTGC TGGTCGTTGA AGACGATTTA GCCATCCAGG AGTTTCTCAA GCGTGCTTTG GTGGAAGCCG GTTACCAGGT GGACGTGGCG GCCGACGGCC GCACCGCCGA GAAGCTTGCT ACGGAAGGCA TTCACGATGG GCTCATCATT GATCTGGGTT TGCCCGACAT TGACGGTCTC GACTTGATCG CGCGCACCCG GGCGCAAGGA AATTCCGCGC CGGTGCTGAT CCTCTCCGCT CGCCGATCGG TGGATGAACG CGTGCGCGGC CTGGAACAAG GCGGCGACGA CTACCTCACC AAGCCATTCG CTCTCTCGGA GTTGCTGGCG CGCTTGCGTA ACCTATTGCG CCGCGCGAGC CCCGGGCAGC ATGAATCGAC GCGGCTGCGG ATTGCGGACC TGGAACTCGA TTTAGTGCGG AGAGAGGCGA AGCGCGGTGC AAATGTGCTG CAACTTACGC CCCAGGAGTT CGCGTTGCTG GAATACTTGT GCCGCAACAC CGGCCGGGTG GTAACACGCA CAATGATCCT GGATCACGTT TGGAAGATGC GGATTGATCC GGCAACCAAC GTAGTGGACG TGCACATCTA CAGGCTGCGA AGCAAGGTGG ACCGCGACGC ACCGAAGGCC CTGATCCACA CCATTCGCGG AGTCGGGTAT GTTCTCAAAG ATTCTTAG
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Protein sequence | MQSRGTKRFG VRLLVVEDDL AIQEFLKRAL VEAGYQVDVA ADGRTAEKLA TEGIHDGLII DLGLPDIDGL DLIARTRAQG NSAPVLILSA RRSVDERVRG LEQGGDDYLT KPFALSELLA RLRNLLRRAS PGQHESTRLR IADLELDLVR REAKRGANVL QLTPQEFALL EYLCRNTGRV VTRTMILDHV WKMRIDPATN VVDVHIYRLR SKVDRDAPKA LIHTIRGVGY VLKDS
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