Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3017 |
Symbol | |
ID | 4071572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3579612 |
End bp | 3580970 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637985036 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_592092 |
Protein GI | 94970044 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0144454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGACA GGGTGCTTTT GGTAGAAGAC CAGGAGGCGC TGAGGCTCGC AGTGCGCGAG TACCTCACTG CCCGTGGCTT CGATGTAGTT GAGGCGGCCA CTTGCGATCA GGCGCGCCGC GTCTTTGCCG ACACCCATCC AACTGCTGCT GTCCTCGACT ACCACTTGCC GGACGGTACG GCGCTCGATC TTTTGCCCGA GTTCAAACGC AGCGATCCGT TCGTGCCGCT GATCATCCTG ACCGCATTCG GAAGTATCGA TCTCGCGGTG GGCGCGATTA AAGCGGGCGC GGATCAGTTC CTCACCAAGC CAGTCGAACT GGCCGCCCTT ACCGTCGTCA TCCAGAGGGC GATTGAAGCC CGACGCGATC GCCAGAAGCA GCTCGCGGGA CGACCGCGAC AGGAGAGGGA AGCCGTCGAT CCCTTTCTTG GATCAAGTGC GCAAATTCGA AAACTCGAAG AGCAAGCTCG ACGCCTGCTC GAAGTAGATA CCCCGGTGCT GATTCAAGGC GAGACGGGCG CAGGCAAAAC GCTCCTCGCG CGCTGGATTC ACGCCAACTC GCGTCGTTCC GATGAAGCCT TCGTTGACCT GAACTGCGCC GGTCTTTCGC GCGAGCTTCT CGAGACCGAA TTATTCGGCC ACGAGAAAGG CGCGTTCACC GGCGCCATCG CGAATAAGAC CGGACTCTTC GAGGTCGCGC ACCGCGGCAC TGTTTTCCTC GACGAGATCG GCGATGTCGA TCCGCAGATC CAACCTAAGC TCTTGAAGGT TTTGGAAGAC AAGCAGTTTC GGCGTCTCGG CGATGTTCGC GATCGCAAAG TGGATGTGCG TCTTCTCGCT GCGACGCACC AGGAGCTTTC CGCTCTTGTC CGCGAGAGGA AGTTCCGCAG CGATCTTTAC TTCCGCATCA GCACCATTCC ACTGAATGTC CCCCCGTTGC GCGAACGCAC GGAAGACATC CCGGTTCTTG CCGAAAAACT CTTGCAGACC TCGACCGCGG AACTCGGCAA GTCAGGTTTC ACCTTGAAAG GAGACGCCAT GGATGCCATG CAGCGTTATG CGTGGCCGGG GAACATCCGC GAACTGAAGA ACGTGATCGA ACGAGCCGTG CTCCTGAGCG GCTCGCGGGA ACTCTCTCGC CGCGATCTCA TGTTCGAGCC GCAAGCGGAA GGTTTCGAGG GCTGGACGAC CGAAGGCAGC CTGACCCTCG AACAGCTCGA GCGCAAATAT ATCGAGTGGA CGCTCCAGCA GAGCGGCGGA AAAGTTGTCG AAGCCGCCAA GCGACTTGAT ATTCCAAAGA GCACGCTCTA CCAGAAGCTG AAACAGTTCA AGATCGAAGG CGGAAGTGCA GAAGAGTAA
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Protein sequence | MPDRVLLVED QEALRLAVRE YLTARGFDVV EAATCDQARR VFADTHPTAA VLDYHLPDGT ALDLLPEFKR SDPFVPLIIL TAFGSIDLAV GAIKAGADQF LTKPVELAAL TVVIQRAIEA RRDRQKQLAG RPRQEREAVD PFLGSSAQIR KLEEQARRLL EVDTPVLIQG ETGAGKTLLA RWIHANSRRS DEAFVDLNCA GLSRELLETE LFGHEKGAFT GAIANKTGLF EVAHRGTVFL DEIGDVDPQI QPKLLKVLED KQFRRLGDVR DRKVDVRLLA ATHQELSALV RERKFRSDLY FRISTIPLNV PPLRERTEDI PVLAEKLLQT STAELGKSGF TLKGDAMDAM QRYAWPGNIR ELKNVIERAV LLSGSRELSR RDLMFEPQAE GFEGWTTEGS LTLEQLERKY IEWTLQQSGG KVVEAAKRLD IPKSTLYQKL KQFKIEGGSA EE
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