Gene Acid345_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2950 
Symbol 
ID4070874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3495699 
End bp3497540 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content59% 
IMG OID637984969 
ProductCl- channel, voltage gated 
Protein accessionYP_592025 
Protein GI94969977 
COG category[K] Transcription
[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.952562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGAC ACCCTGCAAC TCTGAATCCC GCGGGCCAAC TCGCGGCGGA AAGCTCGGAG 
TTCCGCATTC ATCTCGTTTC ATTCCTGGCG GCCATCATCG GTACGGCCGC CGGGTTTGTT
GCGTGGCTGC TTTACCACCT CATTGGTTTC TTCACCAATG TAGCGTTCTA TCACACGATC
AGCTTTACGT TTCATAGCCC GCGGAATCAT CAGCTCGGGC TGTGGGTGAT CCTCGTTCCA
GTGGTCGGCG GGTTGATTGT TGGCGTGATG GCGAAGTATG GATCGTCCAA GATCCGCGGC
CATGGCATTC CCGAAGCGAT GGAAGCCGTG CTGGTAAACC GCAGCCGGAT TGAGCCAAAG
GTCGCGATCT TGAAGCCGCT GTCGGCAGCG ATTGCGATTG GCACGGGTGG ACCGTTCGGA
GCCGAGGGCC CGATCATTCA GACCGGCGGA GCGATTGGAT CGCTGATCGG CCAGGTGATA
CAGACAACCG CGTCAGAGCG AAAAGTTCTT CTCGGCTGCG GTGCTGCGGC CGGCATGGCG
GCGACGTTCA GTACGCCGAT TGCAGCAGTA ATTCTCGCCA TCGAACTCAT CCTCTTCGAA
TTCAAAGCGC GGTCATTTAT CCCGTTGGTT ATTGCGAGCA CGATCGCGAC GAGTCTGCAC
TTTGTGCTGA TGGGACGCGG ACCCATGTTC GAGGTTGGCG CCATTGATTT TGGTATCCCG
CGGGTGTTGC CATGGTATTT GCTGTTGGGT GCGATCTGCG GGTTCTCAGC TGTCGGTTTC
TCGAAGCTTC TCTATTGGGT GGAAGATCAA TTTGAAAAGC TGCCGATTGA CTGGATGTGG
TGGCCGGCAA TCGGCTGCGT GGTCCTCGGC GTCGTTGGCT ATTTTGTACC GCGCGTCCTC
GGCGTGGGAT ACGACACCAT CTCCGACATT CTCAATACTC ACCTCGTGTT CAAAGTACTG
CTGGCAGTAA TGATCTTTAA AGCGCTCGTT CTCCTGGTGA CGATCGGCTC CGGGACTTCG
GGTGGATTGC TGGCTCCAAT GTTCATGGCC AGTGCGGCGA TGGGATCGGC AGTGGCGATG
ATCATCAACC ACTTCATCCC GGGAGCGGGG ATCTCGCCGG CGGCATTTGC GTTGGTGGCG
ATGGGCGCGG TCTTCGGTGC GGCGTCGCGT GCGACGTTCG CGTTCATTAT CTTCGCGTTC
GAGATCACGC GCGATTACAA CTCGATCCTG CCGCTGATGC TGGTGGCGGT CATCGCGGAC
GGCATTGCGC TCGCATTTAG CGAAAACTCG ATCATGACCG AGAAACTCGC GCGACGCGGA
TTGAAGATCC ACTCTGAGTT CGAACCCGAC ATCCTGCGGC AGATGACGGT CTCGCAGGCG
ATGGTTACCG AACCGCCGAG GGTGCCGGAA ACGATGCTGG TACGCGAAAT GGCCGAGCGG
TTGGCGCAGC ACGATCCGAT ACTCTCCCGC CATCAAGGCG TACTGATCGT GGATGATGCC
GGAAAGCTCA AGGGGTTGAT CACGCGCGGT GACCTGCTGC GCGCGATGGA ATCTGAGGAT
GCAGGAACCC AGACCGTTCT GCAAGCTGGT ACGACAAGCC TGCTGACTGC CTATGAGGAT
GAACTCCTTT TCCACGCGGC CTCACGCATG TTACGGGCAG GGGTTGGGCG ATTGCCGGTC
GTGGACCGCA AGGATCCGAC GAAGATTCTC GGCTATCTCG GGCGCGCAGG AGTGCTCTCG
GCACGCCTTC GGCAGATCGA AGAAGAACAG GTACGTGAGG GCGGATGGGC ATCCGCGAAG
CGCAATCCCA AAGCGGCAGG GGAGATCACT CCGGTTAAGT AG
 
Protein sequence
MTRHPATLNP AGQLAAESSE FRIHLVSFLA AIIGTAAGFV AWLLYHLIGF FTNVAFYHTI 
SFTFHSPRNH QLGLWVILVP VVGGLIVGVM AKYGSSKIRG HGIPEAMEAV LVNRSRIEPK
VAILKPLSAA IAIGTGGPFG AEGPIIQTGG AIGSLIGQVI QTTASERKVL LGCGAAAGMA
ATFSTPIAAV ILAIELILFE FKARSFIPLV IASTIATSLH FVLMGRGPMF EVGAIDFGIP
RVLPWYLLLG AICGFSAVGF SKLLYWVEDQ FEKLPIDWMW WPAIGCVVLG VVGYFVPRVL
GVGYDTISDI LNTHLVFKVL LAVMIFKALV LLVTIGSGTS GGLLAPMFMA SAAMGSAVAM
IINHFIPGAG ISPAAFALVA MGAVFGAASR ATFAFIIFAF EITRDYNSIL PLMLVAVIAD
GIALAFSENS IMTEKLARRG LKIHSEFEPD ILRQMTVSQA MVTEPPRVPE TMLVREMAER
LAQHDPILSR HQGVLIVDDA GKLKGLITRG DLLRAMESED AGTQTVLQAG TTSLLTAYED
ELLFHAASRM LRAGVGRLPV VDRKDPTKIL GYLGRAGVLS ARLRQIEEEQ VREGGWASAK
RNPKAAGEIT PVK