| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2855 |
|---|
| Symbol | |
|---|
| ID | 4070374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3395745 |
|---|
| End bp | 3398726 |
|---|
| Gene Length | 2982 bp |
|---|
| Protein Length | 993 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984873 |
|---|
| Product | protein translocase subunit secA |
|---|
| Protein accession | YP_591930 |
|---|
| Protein GI | 94969882 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTAACA AGGCTATTGC CAAGATTTTC GGCACGCAGA ACGAACGCGA GATCAAGCGC
TTGATGCCCA TCGTGGCCCA GATCAACGCG CTTGAGCCGC AGGTGAAGCA GTTCTCCGAC
GACCAGCTCC GTGCCAAGAC CGACGAATTC CGCGCCAAGA TCCAGGAGCG CCTCGCCAAG
TACGAGGAAG CCGAGCACAA AAACCACGCC CTAAAGGAAG TCCTCGACGA GATCCTTCCT
GAGGCCTTCG CCATTTGCCG CGAAGCAGGC TGGCGCGTCC TCAACATGCG CCACTTCGAC
GTCCAGTTGA TCGGCGGCAT GGTGCTGCAC TCCGGGCGCA TCTCTGAAAT GAAAACCGGT
GAAGGTAAGA CGCTCGTCGC CACCCTTCCC GTGTATCTCA ACGCCCTCTC CGGCCGCGGC
GTGCACGTCG TCACCGTGAA TGACTACCTC GCCAAGCGCG ACTCGGAGTG GATGGGAAAG
CTCTACAACT TCCTCGGCCT GTCGGTTGGG GTCATCGTGC ACGATCTCGA CGACGACCAG
CGCCGCGAAG CCTACCGGGC CGACGTCACC TACGGCACCA ACAACGAGTT CGGCTTCGAC
TACCTCCGCG ACAACATGAA GTTCGAGCTC AGCGACTGTG TGCAGCGTGA GTTCAACTTC
GCCATCGTCG ACGAAGTCGA CTCCATCTTG ATCGACGAAG CGCGTACCCC GCTCATCATC
AGCGGCGCCA GCGAAGAGTC CACCGACAAG TATCAGCGCG TCAACGTCAT CATCCCGCGC
CTCGAAAAGG GCGAGGAGAT CGAAGGCAGG GAACCCGGCG ACAAGATTCT CACCGGCGAC
TACGTTGTGG ACGAGAAGCA CAAGACCATC ACCGTAAGTG ACGATGGCTG GGAGAAAGTC
GAAAAGCTGC TCGGCATCGG CAACATCGCC GACCCCGAAA ACTGGGACCT GAAGCACCAC
GTGGAAGTCG CCATCAAAGC CCACGCCCTC TATCACGTCG ACGTGGAGTA CGTGGTGAAG
GATGGCGAAG TCCTCATCGT GGATGAGTTC ACCGGACGCC TGATGCCCGG CCGCCGTTGG
TCCGATGGCC TGCACCAGGC CGTGGAAGCC AAAGAAGGCG TGAAGGTCGA GCGCGAGAAC
CAGACCCTCG CCACCATTAC CTTCCAGAAT TACTTCCGCC TCTACAAGAA GCTCGCCGGC
ATGACCGGTA CGGCGGAAAC GGAAGCCGCC GAATTCGACA AGATCTACAA GCTCGAAGTG
GTGGTCATTC CGACCAACCG CACTCTGCTG CGCAAAGAAA ATCCCGACGT CGTCTACCGC
ACCGAGAAAG AAAAGTTCTT CGCCGTTGCC GACGAGATCG CCAAGCTCTC AGTGAGCCAG
CAGCCAGTGC TGGTCGGCAC GGTTTCCATC GAAAAGTCGG AACGTCTCTC CGAGCTGCTG
AAGCGCAAGA ACATCAAGCA CGTCGTGCTG AACGCGAAGT TCCACGAGCG CGAAGCCGAA
TACGTAGCGC AGGCCGGACG CCTCGGCCAG GTCACGATTG CCACCAACAT GGCCGGCCGC
GGTACCGACA TTCTGCTCGG CGGCAACCCC GAGTTCATGG CCAAGCAGGA GACCCTGAAG
AAGGGCGTTG CCCAGCCCGT GCACGCTGCC GGCGGCGAAG TCGACGCGCG CCCCGACGAT
CCCAACACGG TCTATTGGTA TTACGCCGGC AATGAATACG TCTGCCCGCG CGCGCAGTGG
GAAGAAATCC TCGCACACTA CAAGACGCAG ACCGATTTCG AGCACGAGCA GGTGAAGCAG
GCTGGTGGCC TCTTTATTCT CGGCACCGAG CGCCACGAAT CACGCCGCAT CGATAACCAG
CTTCGTGGAC GCGCCGGCCG ACAGGGCGAT CCCGGTGCAT CGCGCTTCTA TCTCTCGCTC
GAAGACGACC TCATGCGCAT CTTCGCCAAG GAGTGGGTCT CGACCCTTCT CCAGCGGCTC
GGCATGGAAG AGGGCGTGCC CATCGAGTCG AAGATGATCT CGCGCCGTAT CGAGAAAGCG
CAGGAGGCAG TCGAAGCGCA GAACTTCGAA GCCCGTAAAC ACCTCCTCGA ATACGACGAC
GTGATGAACA AGCAGCGTAT GGCCGTTTAC GGCCTGCGCC GCCAACTCCT CGAAGGTCTC
GACCAGAAAG AGCTCATCAT CGACGAGTAC GTCACCGAGA TCCTCGGCGA CCTGCTCGAC
AAATTTGCTC CCACCGAGAA GCACCCCGAA GATTGGGACA TCGCCGGACT CAAGGGCGAG
ATCTTCACCC GCTTTGGCGT GGACATCATT GCTGAGGGCG TCGAGCCCGA GAAGCTCAAT
CGCATGCAGC TTGGCGATGG GATCTTCGAC AAGCTCAAAG AGCGCTACGA AGCAAAAGAG
CAGCTCATCG GCAACGACCA GATGCGTCAC CACGAGCGCG TCATCATGCT CAGCGTGATC
GACCAGCTCT GGAAAGACCA CCTGCTCAAC ATGGACCACC TGAAGGAAGG CATCGGCCTG
CGTGGCTACG CCCAGCACGA TCCGCTCGTC GAGTACAAGC GCGAGTCCTT CGACATGTTC
GAAGGCATGA TGGCCACCTT CAAGGAGCAG ACCGTCCGCT ACCTGTATCT CATGCAGATC
ATCGACGCCG CGACCAATAT GCCCGTCGAA ATCCCGCGCC GCCGCGCTCC GGAGAACGTT
CGCGAGTTGG GTCCGGTGTT GGAAGCTGAG AATGCTCCCG AGCCGCAGAT CTCCGGCGGC
AACGGCCAGC AGCCTCCGCA ACGTCGCCAA CAGACTTCGC TCGACGATCT CGAAAAGCAA
TTCGAGCGTA AGAAGAAGCG TGAGCTCGAA CAGGCTCGCA TGGCGGGCGG CGGCATGCCC
GACGCCGTCC AGCAGGTAGT CCGCAGCGGC GACAAAATCG GCCGCAACGA CCCTTGCTTC
TGTGGCAGCG GCAAGAAATA CAAGAAGTGC CACGGCGCAT AG
|
|---|
| Protein sequence | MINKAIAKIF GTQNEREIKR LMPIVAQINA LEPQVKQFSD DQLRAKTDEF RAKIQERLAK
YEEAEHKNHA LKEVLDEILP EAFAICREAG WRVLNMRHFD VQLIGGMVLH SGRISEMKTG
EGKTLVATLP VYLNALSGRG VHVVTVNDYL AKRDSEWMGK LYNFLGLSVG VIVHDLDDDQ
RREAYRADVT YGTNNEFGFD YLRDNMKFEL SDCVQREFNF AIVDEVDSIL IDEARTPLII
SGASEESTDK YQRVNVIIPR LEKGEEIEGR EPGDKILTGD YVVDEKHKTI TVSDDGWEKV
EKLLGIGNIA DPENWDLKHH VEVAIKAHAL YHVDVEYVVK DGEVLIVDEF TGRLMPGRRW
SDGLHQAVEA KEGVKVEREN QTLATITFQN YFRLYKKLAG MTGTAETEAA EFDKIYKLEV
VVIPTNRTLL RKENPDVVYR TEKEKFFAVA DEIAKLSVSQ QPVLVGTVSI EKSERLSELL
KRKNIKHVVL NAKFHEREAE YVAQAGRLGQ VTIATNMAGR GTDILLGGNP EFMAKQETLK
KGVAQPVHAA GGEVDARPDD PNTVYWYYAG NEYVCPRAQW EEILAHYKTQ TDFEHEQVKQ
AGGLFILGTE RHESRRIDNQ LRGRAGRQGD PGASRFYLSL EDDLMRIFAK EWVSTLLQRL
GMEEGVPIES KMISRRIEKA QEAVEAQNFE ARKHLLEYDD VMNKQRMAVY GLRRQLLEGL
DQKELIIDEY VTEILGDLLD KFAPTEKHPE DWDIAGLKGE IFTRFGVDII AEGVEPEKLN
RMQLGDGIFD KLKERYEAKE QLIGNDQMRH HERVIMLSVI DQLWKDHLLN MDHLKEGIGL
RGYAQHDPLV EYKRESFDMF EGMMATFKEQ TVRYLYLMQI IDAATNMPVE IPRRRAPENV
RELGPVLEAE NAPEPQISGG NGQQPPQRRQ QTSLDDLEKQ FERKKKRELE QARMAGGGMP
DAVQQVVRSG DKIGRNDPCF CGSGKKYKKC HGA
|
|---|
| |