Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2757 |
Symbol | |
ID | 4069448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3264991 |
End bp | 3266232 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637984774 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_591832 |
Protein GI | 94969784 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGCG ATCTGCTTCA ACAGGCAAAC AGCGCCATGC GGCACAACCG CCGGCGCACC GCACTCACCA TGCTGGGCAT GGCATGGGGC ATCGCCACGG TGGTATTGCT CCTCGCCTAC GGCTCCGGCT TTGGCCGCGC GATCACAACG ATTTTCTCGC ACTTCGGCGT GAAGCTGATC GGCGTCTTCC CAGGACGCAC CTCCCAGCAG GCCGGCGGAC AAAAGGCCGG CAGCCAGGTG CGCTTCACTA TGGAAGACTT GGATCGCCTC GCGACCAACG TTCCAATGGT AAAGAGAATT TCGCCGGTGG CTTATCAGCA GACCACGGTT GCAAATGACA CGCGCAGTTA CAACTTCCAG GTTACGGGTT CGTACCCGAA CATAGCGCGG ATCCAGAACG TCAATGTGGA CACTGGTCGG TTTTTCAATG AAGAGGACCT GGCGCAGAAG GGGCGCGTGG CGGTGATCGG CTCCGAGGCG AAGACGAAGC TCTTTTCCGG CGCATACGCG TTGGGCCAGC GCATTCGCAT CAACGGGATT TCGTTCGAAG TCATCGGCAT CATCGAAGCG CGCATGCAGG AAGGCGACAA CGACATCAAT CGCCAGATTT ACATTCCGTT CTCGACCATG GGCGACCTTA AGGACACGCA CTACCTCGAT GGCATCTGGA TTGACTACGA GACCGATCAG TACGAGATGG TGGAGCGCGG TATCCGCACG ACGCTGGCTG ATGCGCATGG TTTCAAACCC GACGATAATC GCGCGATCTT CGTCTTCGAC GCCATGAAAC AGGTGAAGCA GTTCGAGATC ATCACCATGG GTTTGAAAAT CCTGTTGGCG TTCATCGGCA CCCTGACGCT GGGAATCGGC GGTGTGGGCT TGATGAACAT CATGCTTGTT TCCGTGACGC AGCGTACGCG CGAAATCGGC GTCGAGAAGG CGCTCGGCGG ACGCAAACGC GACATCCTCT TCCAATTCCT CGCCGAGGCA CTGACTATCA CGTTCATGGG CGGCGCGATT GGAATCGCAT TCGCCTACAT CGTTTCGTTT AGCGTGGGCC GGCTGACGTT CTACAGCGCG ATTGCGAAGA ATGCGGAAGC CGCTGACATC CGGCTGATCA TCGATCCAAG CACACTCATA GTTGCAACGG TCATTCTCAT CATTGTCGGT ATCGTGAGTG GCATGCTGCC GGCGATCAAA GCTTCCCGGT TAAATCCGAT TGAGGCTCTG CGGTACGAAT AA
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Protein sequence | MVRDLLQQAN SAMRHNRRRT ALTMLGMAWG IATVVLLLAY GSGFGRAITT IFSHFGVKLI GVFPGRTSQQ AGGQKAGSQV RFTMEDLDRL ATNVPMVKRI SPVAYQQTTV ANDTRSYNFQ VTGSYPNIAR IQNVNVDTGR FFNEEDLAQK GRVAVIGSEA KTKLFSGAYA LGQRIRINGI SFEVIGIIEA RMQEGDNDIN RQIYIPFSTM GDLKDTHYLD GIWIDYETDQ YEMVERGIRT TLADAHGFKP DDNRAIFVFD AMKQVKQFEI ITMGLKILLA FIGTLTLGIG GVGLMNIMLV SVTQRTREIG VEKALGGRKR DILFQFLAEA LTITFMGGAI GIAFAYIVSF SVGRLTFYSA IAKNAEAADI RLIIDPSTLI VATVILIIVG IVSGMLPAIK ASRLNPIEAL RYE
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