Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2747 |
Symbol | |
ID | 4069438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3253374 |
End bp | 3256853 |
Gene Length | 3480 bp |
Protein Length | 1159 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984764 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_591822 |
Protein GI | 94969774 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.782351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCTG AATTCGTCCA TCTCCACCTG CATACCGACT ACTCCATGCT CGACGGCGCC AGCGACGTCG AAAAGCTCGT TGCGCGCGTG AAAGAACTCG GCCAGCCGGC GGTCGCCATG ACCGACCACG GCAATATCTA TGGCGCGGTG CACTTTCAGA ACGCTGCGAA AGAGAAGGGC GTCAAGGCGA TCCTCGGGTG CGAGCTCTAT ATCTGCCAGA AGGAGAACCA CCGGGAAGCG CCGGAGGGCG ACAAGTACAA CCACCTCATT GTTCTCGCCG AGAACGAAGA GGGTTACCGC AACCTGGTCA AGATCGTGAG CGAGGCCTCG CTGCATGGCT TCTATTACAA GCCGCGCGTG AGCAAGAATT TTCTCGCCGA ACACTCCAAG GGATTGATCG GGCTCTCGGC GTGCCTGAAG GGTGAAGTCG CCGAGCGGCT GACGGAAGGG AAGTACGAAG CCGCGAAGAA GGCTGCCACT ACCTTTGGCG ACATCTTTGG CGCGAACAAC TTCTATCTCG AAATCCAGGA CCAGGGTCTC GAAGAAGAGA AGCGGATTCA CCAGGGGCTT TTCGATCTCG AGAAAGATCT CGGCTATCCG ATGGTGGCCA CCAACGACAG CCACTATCTT TGCGAAGACG ACAGCCACGC GCAGGACGTG ATGGTCTGCA TCCAGACCGG CAAATCCATC CACGATACCA ACCGGATGAA GTTTTCCACC AACCAGTTCT TCGTGAAGAG CGCGCACGAG ATGTCGCAAG TCTTTACCGG CGCCGATCGC GTGCTCGCGC GGACGATGGA AATCGCCGAG CGCTGCAACG TGAAGCTCGA AAAGGTGAAG AACCCATTCC CGCGCTTCGA CGTTCCCGAA GGCATGTCGA TTGACAGCTA CTTCGAAGAC GTGGCGCGCC GAGGCATGGC CAAACGCATG AACCTGATGC GCGATCTCCA GTCCGCCGGA CGCCTTCGCC ACACCTTCGC GGAATACGAA GAGCGCCTCA ACTTCGAGAT CGACACGATT AAGAAGATGC AGTTCCCAGG CTACTTCCTC ATCGTGTGGG ACTTCATCCG CTACGCCCGC GAGAACAACA TTCCCGTCGG CCCGGGGCGT GGATCGGCCG CCGGATCGCT CGTCGCTTAT GCGATGACCA TCACTGACGT CGATCCGCTG CAGAACAACC TGCTCTTCCA GCGCTTCCTC AATCCCGAAC GTATCTCGAT GCCTGATATC GACGTGGACT TCTGCATGAA CCGTCGCGGC GAGGTCATCA AGTACGTGAC CGAGAAGTAT GGCCGCGACC AGGTGGCGCA GATCATCACC TTCGGCACCA TGGCTGCGAA GGCCGCGATT AAAGACTGCG GCCGCGCCAT GGACATCCCG TACGCCGAGG TCGATCGCGT GGCGAAGATG GTGCCCACCA CCATCAACAT CACGATTGAT GGCGCGCTCA AAGATTCGCC GATGCTCGCC ACCGCCTACG AATCTGAGCC TCAGGTAAAA GAGCTCATCG ACACCGCCAA GCGCCTCGAA GGCCTGGTGC GCAACTCGGG CGTGCACGCT TCCGCTGTGG TGATCGCGCC GCAGCCGCTT ACCGACCTCG TCCCGCTGCA TAAGACGAAG AACGACGAAA TCGTCACCGC CTACGACATG AAGGCGGTCG AAAAGATGGG CCTGCTGAAG ATGGACTTCC TCGGGCTCAC TACGCTCACT ATTCTCGACG ACGCTCTCAA ACTCATCGAC CAGACCCAGG GCGTGAAGAT CGAGCTCGAG AAGCTTCCGT TCGACGACAA GCAGACCTAC GAGCGCATCT TCCACAGCGG ATACACGAGC GGCGTCTTCC AGTTTGAAAG TTCGGGCATG CGTGATGTGC TGCGCAAGTA CAAGCCCGAT ACCGTCGAAG ACCTTACCGC TCTCAACGCA CTGTACCGCC CCGGCCCAAT TCAGGGCGGC ATGATCGATG ACTTCATCAA CCGCAAGTGG GGCCGCGCCA AGGTCGACTA CTTCCATGAC GATCTCAAAA CCATCCTGGT CGAGACCCTC GGCGTCATCG TGTACCAGGA GCAGGTGATG CAGATCGCCA ACAAACTCGC AGGATACTCA CTCGGTGATG CTGACCTGCT CCGGCGCGCG ATGGGTAAAA AAGACGCGAA GGAGATGGAG AAGCAACGCG ACCGCTTCAC CAAGGGTGCG ATCGATCGCG GCTACGACAA GCAGCTCACG GTCCACATCT TCGACCTGAT GGAACAGTTC GCGGGCTACG GCTTCAACAA GTCGCACTCC GCCGCTTACG CACTGCTCGC GTATCACACC GCATATCTCA AGACGCATTT TCCCATCGAG TTCATGGCGG CGCTGCTCAC CTCGGTCTCC GGCAGCACCG ACGACGTGGT GAAGTACATC AACGAGTGCC GCGACATGGG CATTGAAGTT CGTCCGCCGG ACGTGAACGT TTCGCTGGCG AGTTTTACGC CCGACCAAGG GGCGATTCGC TTCGGACTTT CAGCAATCAA GAACCTCGGA CACAACGCGA TTGAGTCCAT CGTTACGGCC CGACAGGCCA TCGGTAAGTT CTCTTCTTTC TTCGAGTTCT GTGAGAAGGT TGATCTAAGG CTTCTCAATA AACGTGTTGT CGAGTCGCTG ATCAAGAGTG GTGCCATGGA TCCGCTCGGC CGCCGCTCGC AGCTCTTTGC CGTCATCGAC AAGGCCATGG AAGCTGCGCA GAAAACCCAG CGCGATGCCG AGTCCGGACA GCACGGCTTA TTCGGCGTCT TCGACGAAGA GCCGGTCGCA GGGAAGAAGG TCGACTCGCT TCCTAACGTC CCTGACTGGG ATGAGCACCA ACGCCTCGCC AACGAGAAAG AAATCCTCGG CTTCTTCATC ACCGGTCATC CGATGGAGAA GTACAAGGAC AAGCTCGCCG ACTTCCGCGC GATGAGCACA GAAGACCTCA AGAACATGCG CACCTCCACC GCGAAAGGCG AGGAGTACTA CGTTGGAGGC GTGATGAGCG GCGTGAAAGT CGCGAAGTCG AAGAAGGGCG ACATGTACGC GCTCGGCACG TTGGAAGACA TCCACGGCGC AGTGAGCTTC CTCTGCTTCA ACGAAAACTA CAAGCGGCTG GTCGACAAGC TGAAACTCGA AGTGCCGGTA CTGGTGAAGG GCGCAATCCG CATTGAAGAA GATAATCCGC CAAAGATCAT GGTGAGCGAC ATCATCCCTC TCGACACCGC CGTGCCCAAG CTGCCGCAGA AGGTTCGTGT GCGGGTGCCG CTGAATAGCT CAACGGAAGG CACGCTCGAC GCGCTGCACG GAATCTTTGG CGAGTGCAAG GGAACGGCTA AAGTGCTCTT TGATTTGGAG ATGCCGGGCG ACTTCCTAGT GGTAATGGAA GCGGAAAGCT ATAATGTTCA AGCGGACCGG GCGTTTGTCG CGCGGGTAGA GGAGTTGTGC GGCCGCGGTG CAGTTCGAGC CATCGACTAA
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Protein sequence | MPPEFVHLHL HTDYSMLDGA SDVEKLVARV KELGQPAVAM TDHGNIYGAV HFQNAAKEKG VKAILGCELY ICQKENHREA PEGDKYNHLI VLAENEEGYR NLVKIVSEAS LHGFYYKPRV SKNFLAEHSK GLIGLSACLK GEVAERLTEG KYEAAKKAAT TFGDIFGANN FYLEIQDQGL EEEKRIHQGL FDLEKDLGYP MVATNDSHYL CEDDSHAQDV MVCIQTGKSI HDTNRMKFST NQFFVKSAHE MSQVFTGADR VLARTMEIAE RCNVKLEKVK NPFPRFDVPE GMSIDSYFED VARRGMAKRM NLMRDLQSAG RLRHTFAEYE ERLNFEIDTI KKMQFPGYFL IVWDFIRYAR ENNIPVGPGR GSAAGSLVAY AMTITDVDPL QNNLLFQRFL NPERISMPDI DVDFCMNRRG EVIKYVTEKY GRDQVAQIIT FGTMAAKAAI KDCGRAMDIP YAEVDRVAKM VPTTINITID GALKDSPMLA TAYESEPQVK ELIDTAKRLE GLVRNSGVHA SAVVIAPQPL TDLVPLHKTK NDEIVTAYDM KAVEKMGLLK MDFLGLTTLT ILDDALKLID QTQGVKIELE KLPFDDKQTY ERIFHSGYTS GVFQFESSGM RDVLRKYKPD TVEDLTALNA LYRPGPIQGG MIDDFINRKW GRAKVDYFHD DLKTILVETL GVIVYQEQVM QIANKLAGYS LGDADLLRRA MGKKDAKEME KQRDRFTKGA IDRGYDKQLT VHIFDLMEQF AGYGFNKSHS AAYALLAYHT AYLKTHFPIE FMAALLTSVS GSTDDVVKYI NECRDMGIEV RPPDVNVSLA SFTPDQGAIR FGLSAIKNLG HNAIESIVTA RQAIGKFSSF FEFCEKVDLR LLNKRVVESL IKSGAMDPLG RRSQLFAVID KAMEAAQKTQ RDAESGQHGL FGVFDEEPVA GKKVDSLPNV PDWDEHQRLA NEKEILGFFI TGHPMEKYKD KLADFRAMST EDLKNMRTST AKGEEYYVGG VMSGVKVAKS KKGDMYALGT LEDIHGAVSF LCFNENYKRL VDKLKLEVPV LVKGAIRIEE DNPPKIMVSD IIPLDTAVPK LPQKVRVRVP LNSSTEGTLD ALHGIFGECK GTAKVLFDLE MPGDFLVVME AESYNVQADR AFVARVEELC GRGAVRAID
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