| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2673 |
|---|
| Symbol | |
|---|
| ID | 4071927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3150478 |
|---|
| End bp | 3151290 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984690 |
|---|
| Product | Rieske (2Fe-2S) oxidoreductase |
|---|
| Protein accession | YP_591748 |
|---|
| Protein GI | 94969700 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
[COG4244] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCGC GCGCCCACAT TTCGTCGCAC CCCATCCATC CCATGCTCGT GTCGCTTCCC
ATCGGCCTCT GGATCGGCGC CTTCGTCTTC AGCCTCATCG GATATCTCAC CGACCGTTCC
CTGCTCAACG CGGCCGGCTT CTACACTCTC ATCGCCGGAT GTGTCGGCGC AGCGCTTGCC
GCTGTTCCCG GTGTCATCGA TCTCTTTACT GTCGTTCCCG ATCGCTCCAG CGCGCGCAGC
CGCGGATACA TTCACGGCTC CGTCAACATC GTTGCCCTCT TCCTGTTCCT CTACGCCGCA
GCACGCCAGG GCAGTCCTTT CGACGCCCCC GATCAAACGG TTCTCATCGT CGAATTTCTC
GGCATCTGCT GCATTGGCTA TTCCGGATGG CTCGGCGGCA CGCTCGCCTA TCGCAATCAA
ATTGGCGTCG AACACCTCTA CGCGAATGCC GGCAAATTGA AAGAACGTAC CGTTGACGGT
TTCGAGCGTC CAGTCTGCAA TCAATCCGAA CTCGCGGATG GCCAGGCCAT GCTGGTGCAC
ATCGGTGGTG AACGCATCGC CGTTGCGCGT TGCTCCGAAG GCATCTTTGC TTTCAGCGAT
CGCTGCACTC ACAAAGGCGG CCCGCTCTCC GACGGCGCCA TCGTCGGCTG CGCCGTGCAA
TGTCCGTGGC ATGGATCGCA ATTTGATATT CGTAACGGCC GCGTAATCGC GGGCCCAGCC
GAAGACCATC TCAAGACTTA CGCCATCGAA ATCACTGCCG GCGAAGTTTA CATTCGACGC
CAGCCCAGTA TTCCCGATCG CAAAGCCGCG TAG
|
|---|
| Protein sequence | MRSRAHISSH PIHPMLVSLP IGLWIGAFVF SLIGYLTDRS LLNAAGFYTL IAGCVGAALA
AVPGVIDLFT VVPDRSSARS RGYIHGSVNI VALFLFLYAA ARQGSPFDAP DQTVLIVEFL
GICCIGYSGW LGGTLAYRNQ IGVEHLYANA GKLKERTVDG FERPVCNQSE LADGQAMLVH
IGGERIAVAR CSEGIFAFSD RCTHKGGPLS DGAIVGCAVQ CPWHGSQFDI RNGRVIAGPA
EDHLKTYAIE ITAGEVYIRR QPSIPDRKAA
|
|---|
| |