Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2529 |
Symbol | |
ID | 4072173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2986411 |
End bp | 2987727 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637984546 |
Product | nodulation efficiency protein NfeD |
Protein accession | YP_591604 |
Protein GI | 94969556 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.942851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.950756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCC TGTTGCTGCT TTTCGCCGCG CTCTGTATCG CCCTGCCGTC TCTCGCGCAA GTCGTCCGCC TCAAGCTCGA CGACACCATT CAGCCGGTCT CCGAGGAATA CATCAGCCGC GGCATCGATT ACGCCGCAGA GCACAACGCA CAGGCTGTCT TGATCGAGTT GCATACCCCC GGCGGCCTGG TCACCTCTAC GCGCGCCATC ATCTCGAAGA TCCTTGGCTC CAAGGTTCCC GTAATCATTT ACGTCTATCC GACAGGCGCG AATGCAGCTT CCGCGGGTTT CTTCATCCTT GAGTCCGCCG ACATCGCCGC CATGGCGCCC GGCACCAACA CCGGCTCTGC CCATCCCGTC TCGCTGGCCT TTGGCGTAGC GCAAACAAAG GAAGACGACA CGATGAAGGC CAAGATCGAA AACGATCTCG CGGCCTTCCT TCGTTCATAC GTCTCCAAGC GCGGACGCAA CGTCGCTCTC GCCGAAACCG GCGTACGCGA ATCAAAAGCC TTCTCCGACC AGGAAGCCCT CAGCCAGAAC CTGATTGACG TCATCGCCAA AGACGAGCAG GACCTGCTCT CACAAGTGAA TGGCCGCACC GTAAAACGTT TCGACGGCAG CACGGTCGTC ATGAAAATCG CCGCTGCTCC CATCACCGAT TACGACCGCT CGCTCAAAGA ACGCCTCCTC GGCTTCCTCG TCGATCCCAA TATCGCGTTC CTCATTTTCG CCATCGGCGC CATCGGTCTA TACGCGGAGT TCAATCATCC CGGCGCGATC ATCCCCGGCG TTGTCGGAAC CGTCTGCATC CTGCTTGCGC TATTCGCGTT CCATTTCCTT CCGATACGTT ACGCAGCCGT CACGCTCATC CTCGCCTCGT TTATCTTCTT TGCGCTCGAA GCTAAATTCG CCACCCACGG AATTCTCGGC ATCGCCGGTA TCGCCTGCCT CGCTCTCGGT GGCATGTTGC TGGTGGATGG TCCCATCCCC GAAATGCGCG TCAAGTGGGA AATGGCGCTC TCTGTCTCGG TCGCCTTTGG CCTGATCACT GTCTTCCTGA TGACCATCGC CCTCCGCGCG CGCCGCAATA AGGTGACCAC CGGCATTCAA GGCCTGCTGG GCCAGACCGG CGTCGCCCGT TCGCCGTTAT CACCAACCGG CAAAGTTACG GTCATGGGTG AGATCTGGGA CGCCGCCTCG CTGGTACCCG TCGCAGCCGG CGAACCGGTC GTTATACGCG GGATTGACGG GCTTACCCTG CGCGTCGAGC CCGTCGCACA ATCTGTCGCC GCACGAGAAG TCGTATTACA GCGTTGA
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Protein sequence | MRRLLLLFAA LCIALPSLAQ VVRLKLDDTI QPVSEEYISR GIDYAAEHNA QAVLIELHTP GGLVTSTRAI ISKILGSKVP VIIYVYPTGA NAASAGFFIL ESADIAAMAP GTNTGSAHPV SLAFGVAQTK EDDTMKAKIE NDLAAFLRSY VSKRGRNVAL AETGVRESKA FSDQEALSQN LIDVIAKDEQ DLLSQVNGRT VKRFDGSTVV MKIAAAPITD YDRSLKERLL GFLVDPNIAF LIFAIGAIGL YAEFNHPGAI IPGVVGTVCI LLALFAFHFL PIRYAAVTLI LASFIFFALE AKFATHGILG IAGIACLALG GMLLVDGPIP EMRVKWEMAL SVSVAFGLIT VFLMTIALRA RRNKVTTGIQ GLLGQTGVAR SPLSPTGKVT VMGEIWDAAS LVPVAAGEPV VIRGIDGLTL RVEPVAQSVA AREVVLQR
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