Gene Acid345_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2206 
Symbol 
ID4069096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2626724 
End bp2627509 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID637984222 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_591281 
Protein GI94969233 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0587036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.882414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGA AGAAGACGCA AAAGAAACCC GAAGCTCGCA TCGTCAGGCG TAAATTGCCT 
CCACTTGAGT TGCGTCGCTT GGAAGATCAA GTTGTATTGA TTACCGGCGG CAACCGCGGG
ATCGGCCTTG CCATGGCGCG TGCGGTCGCC AAAGAAGGCG CGAGCGTGAT CATTACCGGG
CGCGATGAAC ACACGCTCCA TCATGCAGCT GACCAGATCA AGCGCGATGG CGGGACCGTC
GTCAGCCACG TTTGCGATGT GCGAGACGAG GATTCGGTTG ACGAGTTGTT CGCGGCAATC
CACCGGCACT ATTCGCAGAT CGATGTACTC GTCAACAACG CGGGATTGGC GCAGCGCAAC
GCGCAGGTGG ACCATCTTTC GCTCGAGGCA TGGCAAGCCT GCATCGAGAC CAATCTCACG
GGCGCATTTC TTTGCACACG CGCAGCGTTG CCGATGATGT CTCCTGGCGC GACGGTGGTG
AATAACGTCT CGGTCGCCGC CAACACGGCG TTTCCGGGCA TGGCCGCGTA CAGCGCCTCG
AAAGCGGGAT TACTGGCATT CACCAATACG TTGCGAGAGG AACTGCGGCC GCGGGGTATC
CGCGTGATTT CGCTGGTGCC GGGCGCAACC GATACCGAGA TCTGGCAGCA ATTTTGGAAG
GACGCGCCGC GCGAGAAGAT GATGTCGGCG GAGAGCGTGG CCGATGCCGT GGTGGCAGCC
CTGTGTCTGC CGGCAAACGC GACCATCGAA GAGTTATTGA TCAGGCCAAC GGCCGGAACG
CTCTAA
 
Protein sequence
MARKKTQKKP EARIVRRKLP PLELRRLEDQ VVLITGGNRG IGLAMARAVA KEGASVIITG 
RDEHTLHHAA DQIKRDGGTV VSHVCDVRDE DSVDELFAAI HRHYSQIDVL VNNAGLAQRN
AQVDHLSLEA WQACIETNLT GAFLCTRAAL PMMSPGATVV NNVSVAANTA FPGMAAYSAS
KAGLLAFTNT LREELRPRGI RVISLVPGAT DTEIWQQFWK DAPREKMMSA ESVADAVVAA
LCLPANATIE ELLIRPTAGT L