| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2204 |
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| Symbol | |
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| ID | 4069094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2625667 |
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| End bp | 2626422 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984220 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_591279 |
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| Protein GI | 94969231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.138216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.88573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCCCC TGAAAGACGA TACCCCGCGG TTCAGCACTC CGTACGTCAC GTATTTCCTG
CTGGGCTTCA ATGTTCTTGT GTTCCTGCTC CAGAAATGGG TGGAGTGGGC GCAGGGCGCC
GTCGCTGCCG ACCAACTGGT GCTCGTCTTC GGATTGATCC CGATCAAAAT CCCAATCGTC
CTCGCTGGCG GCCAAGTTCC TCTCAAGATT GTCGGCTACC TGGGGATGCG CTACGTCACC
CCACTCGGAG CATTTCTGCC GATCCTCACC TCCATGTTCT TGCATGGTGG GTGGTGGCAC
ATCATCGCCA ACATGTGGGC GCTCTGGATC TTTGGCGACA ATGTCGAGGA CTACCTCGGA
CACTTTGCCT ACCTGCTGTT CTATCTCGGG GCGGGAATCG CTGGTGCGAT CGTGCACGTG
ATCTTCAACT GGAACTCGGT TATCCCCACG GTCGGCGCCA GCGGTGCGAT TGCCGGCGTG
ATGGGCGCGT ACTTCGTGCT CTATCCCAAA GCTCGCGTGC TGACGCTGGT TCCCTTCTTC
TTCGTGTTTT TCGTCTGGTT GCCGGCGTGG ATCGTCCTCG GCTTCTGGTT CCTGGCGCAA
TTCCTGAACG GAGCAGCCAG CGCGATCTCC GTCCAGCGCG GAGCCACCGG AGGCGTTGCC
TTCTGGGCCC ACGTTGGAGG ATTTCTAACC GGACTGCTGT TGATCAAACT TTTGCCACAA
CGACCGCGGC TCTACCGCTA CAGTGGATGG AATTAA
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| Protein sequence | MIPLKDDTPR FSTPYVTYFL LGFNVLVFLL QKWVEWAQGA VAADQLVLVF GLIPIKIPIV
LAGGQVPLKI VGYLGMRYVT PLGAFLPILT SMFLHGGWWH IIANMWALWI FGDNVEDYLG
HFAYLLFYLG AGIAGAIVHV IFNWNSVIPT VGASGAIAGV MGAYFVLYPK ARVLTLVPFF
FVFFVWLPAW IVLGFWFLAQ FLNGAASAIS VQRGATGGVA FWAHVGGFLT GLLLIKLLPQ
RPRLYRYSGW N
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