| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1954 |
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| Symbol | |
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| ID | 4071430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2346579 |
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| End bp | 2347415 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983966 |
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| Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_591029 |
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| Protein GI | 94968981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.524488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCG GACAGATCAC ACGCCAGCCC TCCAAGGCCG GGCGCCACGA CAAACCAGCG
AAAGCAGTGA CCCTCAACGT GAAAGTAAAA GCCAGTACGC CCGCCAAACT CGCGAAAGCT
CCGGCGAAGA AATCCGCGAG CGGCGCGGTG CCCAAGGGTT ACAACCCCAT CGCCCCCGAG
CGGGTGCAGG AAATTCTGAA ACGTCTGGAA GCGACCTATC CCGGCGTAAA GTGCGCTCTA
CACCACCACA ACGCATGGGA ACTGCTAGTC GCGACGATCC TTTCCGCGCA GTGCACCGAC
GTCCGCGTGA ACATGGTCAC GCCCGAACTC TTCCGGAAAT ATCCCACGCC CCAGGCATTC
GCCGGGCTGA AGCCCGAACA ACTCGAGCCA GATATCCGCT CCACTGGCTT CTTCCGCAAC
AAGGCCAAGT CCATCGTGGG CGCGGCAAAG GTCATAGTGA ACGACTTCGG AGGCGAAGTC
CCAAACGAGA TGGACAAGTT GCTAACCGTG CCCGGCGCCG CCCGTAAGAC CGCCAACGTC
GTCCTAGGTT CGTGGTTCGG TATTGCCGCA GGGGTGGTGG TAGACACCCA CGTCCACCGC
ATCTCACGTC GCCTCGAACT GACGAAAAAT AACGATCCGA AAACGATCGA GCAGGATTTA
ATGAAGATTC TTCCACGCGA CAGGTGGATC AATTTTTCGC ACGAGATCAT TCATCACGGG
CGCGCAATCT GCATCGCGCG CAAACCGAAA TGCGTAGATT GCTCGCTGGA AAATATTTGC
CACGCCGCCG ACAAAACGTG GAGCACCGTC GAAATTCATA AGAGCGCGCA GCCATGA
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| Protein sequence | MARGQITRQP SKAGRHDKPA KAVTLNVKVK ASTPAKLAKA PAKKSASGAV PKGYNPIAPE
RVQEILKRLE ATYPGVKCAL HHHNAWELLV ATILSAQCTD VRVNMVTPEL FRKYPTPQAF
AGLKPEQLEP DIRSTGFFRN KAKSIVGAAK VIVNDFGGEV PNEMDKLLTV PGAARKTANV
VLGSWFGIAA GVVVDTHVHR ISRRLELTKN NDPKTIEQDL MKILPRDRWI NFSHEIIHHG
RAICIARKPK CVDCSLENIC HAADKTWSTV EIHKSAQP
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