| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1890 |
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| Symbol | |
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| ID | 4073351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2267056 |
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| End bp | 2269707 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637983899 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_590965 |
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| Protein GI | 94968917 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.911566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0476843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT TGCGAGCAAT AGGCCAACGT TTCCTGGGCT TTTTCGGGCG GGAGAGGCGG
GAACAAGAGT TCAATGACGA ACTGGCGAGC CACGTCGAGA TGCAAACGGA CGACAACGTC
CGCGCAGGAA TGTCGCCGGA AGAGGCACGA CGCCAGGCGA TCCTGAAGCT TGGTGGGCTG
GAACACACGC GGCAGGCGTA TCGCGAGCGC GGATCGCTTC CCTTCCTCGA GAGCCTAGAG
CAGGACCTGC GTTTTGCCGC ACGCCAGTTT ACGAAGAACC GGGCGTTTGC CGTGACTGCG
TTGGTGGTGC TGTCGCTGGG AATCGGGGCG ACCTCGGCGA TCTTTGCGTT TGTGGATGCA
GCGCTGATTC GACCATTACC ATATCGCGAT CCGAACCGGC TGGTATTCGT CACCGAAAAG
ACGAACCAGA TTCCGAAGGC GAACCTCTCT TACCAGGACT ACGAGGACTG GAAGAGCAAG
AACGAAGTAT TGAGCAGGTT CGACGTTTGG ACGGGATCGG GCATATTGCT GAACGGTCCC
TCCGGGCCGG AGGCCGTGAA CGGCGTTGAG GCAACGCCGG GGATCTTCCG CACTCTCGGG
GTAGAGCCGG CTCTCGGCCG AGACTTCCAA GACGGCGAGG ACGATCCCAA GGCCGCGCCG
GTGGTCATCT TGACCTACAA GGCATGGCAA AAGCGTTTCG GCGGCAGGCC CGACATCATT
GGACAGACAC TGAGAACGAG CGAGAAGGTG TACACCGTGA TCGGAGTGCT GCCCGCGAGC
TTCCAATTCG CCCCGCGCGG GAATGCGGAG CTCTGGATGC CGTTGCAACA CACGCAGGGG
TGCATGGCGC GGCGAAGCTG CCATGGACTC GTTGGGGTGG GCCGGTTGAA GGATGGCGTT
TCCGTCGAGA CGGCGCTGGC CAACTTCTCG GCGATCGCGC GGCAGTTGGA GATCGCCTAT
CCGGATTCGA ATCGGGGGCA GCTCGCCTAT GTGAGTTCGT TGTCAGAACA AATCGTGGGC
GATGTGCGTC CGCTGCTCCT GTTACTGCTG GCTGGCGCGG CGCTGCTGCT GGTGATCGCC
TGTGTCAACG TCTCGAGCCT GCTGTTGGTA CGTTTTGAGA GCCGCCGTCG GGAGGTGGCA
GTGCGGCGCG CAATGGGAGC ATCGCACTGG CGCCTGATAC GACAGTTCCT GACGGAAGGC
GTTCTGCTGG TGACGGCGGC GTGCGTTGCG GGGCTCGCGC TGGCGCAGCT TGCGATTCAG
ATGCTCGTGC GTCTGCCCTC CAAAGAAATG CTGGAGGCAA TGCCTTCGAT GCAGGGACTC
CGAGTGAACC TGCATGTTGC TGGGTTCGCG TTCGCAATTG GTGCAATGGC TGCGTGCATC
TTTGCAGTCG CACCGTCGAT CAGGCTGCCG TTGGCGGATG GGATTCGCAA TGAGCTGGCT
GAAGGCGGCC GATCCGGATC GAGCACTTTG TGGAGAAAAT TCGCGTCGAA CCTGGTGGTG
CTGGAACTGG CGACAGCAGT CATTCTGTTG GCGAGTGCTG GTCTGCTGGG AAAGAGCTTC
TACAAGCTCC TGCATGTGGA TTTGGGATTT GCACCGGACC ACTTGGCGAT GGTGGACGTC
GTGATTCCAG AGTCAGTCGC ACCGAAGCCA CCCGACCAGT CGGCACTCGC GAAGCGAGTC
GTAGAACGAG TTGGAAGTGT GCTGGGGGTC GAACTGGGAA GCGTCACGAG CGTGGCGCCG
GTGAATTACA ACGGCAATAC GACGTGGATC CGTCTTCCCG GCAAACCATA CAACGGTGAA
CACAACGAAG TATTGCAGCG GGAAGTCAGC TCGAATTATT TCAAGATGCT GCGCGCGCAA
TTGGCGAGCG GACGATATTT CGAAGAAACC GACGATCTGA ACCGACCCCT GGTAGCGATG
ATCAATGAAG CGTTGGCCCG CAAGTATTTC CCGGGAGAAG ACCCTCTAGG GAAACAAATC
GGCGACACGA CACTTTCTCC TAAGTCTATG GTTCAGGTGG TTGGCGTGGT GAAGGACATG
CGCGAGGGGC CGCTGGACGC AGAGATCTGG CCTGCGATTT ATTATCCGAT CACCCAGAAT
ACGGATACGT TCTTCACGGT AATGGCACGC ACTTCGCAGC GAGAAGAAGG CATCATCGCG
GCGTTAGAGA AGGCGGTACG CGCGGAAGAC CCGAGGATCG GCACGTTCAA CGAACGCACG
ATGCAGCAGA CGATCGAGAC CTCGCCTACT GCTTACGTGC ATCGGGCTGC GGCGTGGCTG
GTGGGTGGAT TTGCGTCCCT GGCGCTGCTG CTTGGCGTGG TCGGCCTCTA CGGAGTGATT
GCGTATTCGG TGAGCCAGAG AACGCGCGAA ATCGGTGTAC GCATGGCGCT GGGTGCACAA
CGCAGCTCCG TATACAGCAT GGTGCTGAAG GAAGCCGGGT GGCTTACGGT CGCGGGTGTA
GCCACAGGGT TGGCGGGCGC TGTCGGCGCA GCAACGATGA TGCGTTCCCT GCTCTTCCAG
GTGCGTGCCT GGGACGTGAC AACCCTGCTG GGCGTAGCGG TGCTGCTCGC GACGGCAGCG
CTGGTCGCGA GTTATTTGCC GGCGCGGAGG GCGGCGTCAG TGAATCCGGT GGAGGCGCTG
AGAGCGGAAT AG
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| Protein sequence | MKALRAIGQR FLGFFGRERR EQEFNDELAS HVEMQTDDNV RAGMSPEEAR RQAILKLGGL
EHTRQAYRER GSLPFLESLE QDLRFAARQF TKNRAFAVTA LVVLSLGIGA TSAIFAFVDA
ALIRPLPYRD PNRLVFVTEK TNQIPKANLS YQDYEDWKSK NEVLSRFDVW TGSGILLNGP
SGPEAVNGVE ATPGIFRTLG VEPALGRDFQ DGEDDPKAAP VVILTYKAWQ KRFGGRPDII
GQTLRTSEKV YTVIGVLPAS FQFAPRGNAE LWMPLQHTQG CMARRSCHGL VGVGRLKDGV
SVETALANFS AIARQLEIAY PDSNRGQLAY VSSLSEQIVG DVRPLLLLLL AGAALLLVIA
CVNVSSLLLV RFESRRREVA VRRAMGASHW RLIRQFLTEG VLLVTAACVA GLALAQLAIQ
MLVRLPSKEM LEAMPSMQGL RVNLHVAGFA FAIGAMAACI FAVAPSIRLP LADGIRNELA
EGGRSGSSTL WRKFASNLVV LELATAVILL ASAGLLGKSF YKLLHVDLGF APDHLAMVDV
VIPESVAPKP PDQSALAKRV VERVGSVLGV ELGSVTSVAP VNYNGNTTWI RLPGKPYNGE
HNEVLQREVS SNYFKMLRAQ LASGRYFEET DDLNRPLVAM INEALARKYF PGEDPLGKQI
GDTTLSPKSM VQVVGVVKDM REGPLDAEIW PAIYYPITQN TDTFFTVMAR TSQREEGIIA
ALEKAVRAED PRIGTFNERT MQQTIETSPT AYVHRAAAWL VGGFASLALL LGVVGLYGVI
AYSVSQRTRE IGVRMALGAQ RSSVYSMVLK EAGWLTVAGV ATGLAGAVGA ATMMRSLLFQ
VRAWDVTTLL GVAVLLATAA LVASYLPARR AASVNPVEAL RAE
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