Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1716 |
Symbol | |
ID | 4072061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2084419 |
End bp | 2085027 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637983724 |
Product | hypothetical protein |
Protein accession | YP_590791 |
Protein GI | 94968743 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0478971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGAAGT CGAATAAGAA GGAAGAGGAG CACAAGGCAG CCCCGGCTCC GGCACCAGCG CCCGCGTATC ATCCGCCCGC GCCGCCGCCG GCACCGCCTG TGGCCGCGGC TCCGGTAGCA CCGGTCGTAC AACCACCGAA GATGGAGGTC CAACCTAAGA TGGGCGACAT TGCGCACATT GGAAAATCAG TGATCATTCG CGGCGAACTT TCGGGCAGCG AAGATCTTTT CCTGGATGGC GAAGTAGAAG GCAGCATCGA TCTGAAGGGC CATGCGCTGA CAATCGGGCC GAATGGCCAC ATTAAGGCGA ATGTGCATGC CAAGGAAGTC GTTGTGCACG GACGGGTGGA TGGCAATATT CGCGCGGCGG ACCGTGTGGA ACTGAAGAAG TCGGCGGTGC TTTCGGGCGA CATCTTTACG CAGCGCATCA TGATTGAAGA CGGCGCGTAC TTCAAAGGCG CCATCGATAT CCAGAAGGCG GGAACCGAAC CGAAACCGGA GCCGAAGAAG GAAACTGCTG CGGCCGCTGC GACGAATGCG ACCAACACGT TCAGTTCGAG TTCGACGTTT ACACCGGCAT CGCAGGCACC GCTGATCGAG ACAAAATAG
|
Protein sequence | MWKSNKKEEE HKAAPAPAPA PAYHPPAPPP APPVAAAPVA PVVQPPKMEV QPKMGDIAHI GKSVIIRGEL SGSEDLFLDG EVEGSIDLKG HALTIGPNGH IKANVHAKEV VVHGRVDGNI RAADRVELKK SAVLSGDIFT QRIMIEDGAY FKGAIDIQKA GTEPKPEPKK ETAAAAATNA TNTFSSSSTF TPASQAPLIE TK
|
| |