Gene Acid345_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1716 
Symbol 
ID4072061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2084419 
End bp2085027 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID637983724 
Producthypothetical protein 
Protein accessionYP_590791 
Protein GI94968743 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0478971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAGT CGAATAAGAA GGAAGAGGAG CACAAGGCAG CCCCGGCTCC GGCACCAGCG 
CCCGCGTATC ATCCGCCCGC GCCGCCGCCG GCACCGCCTG TGGCCGCGGC TCCGGTAGCA
CCGGTCGTAC AACCACCGAA GATGGAGGTC CAACCTAAGA TGGGCGACAT TGCGCACATT
GGAAAATCAG TGATCATTCG CGGCGAACTT TCGGGCAGCG AAGATCTTTT CCTGGATGGC
GAAGTAGAAG GCAGCATCGA TCTGAAGGGC CATGCGCTGA CAATCGGGCC GAATGGCCAC
ATTAAGGCGA ATGTGCATGC CAAGGAAGTC GTTGTGCACG GACGGGTGGA TGGCAATATT
CGCGCGGCGG ACCGTGTGGA ACTGAAGAAG TCGGCGGTGC TTTCGGGCGA CATCTTTACG
CAGCGCATCA TGATTGAAGA CGGCGCGTAC TTCAAAGGCG CCATCGATAT CCAGAAGGCG
GGAACCGAAC CGAAACCGGA GCCGAAGAAG GAAACTGCTG CGGCCGCTGC GACGAATGCG
ACCAACACGT TCAGTTCGAG TTCGACGTTT ACACCGGCAT CGCAGGCACC GCTGATCGAG
ACAAAATAG
 
Protein sequence
MWKSNKKEEE HKAAPAPAPA PAYHPPAPPP APPVAAAPVA PVVQPPKMEV QPKMGDIAHI 
GKSVIIRGEL SGSEDLFLDG EVEGSIDLKG HALTIGPNGH IKANVHAKEV VVHGRVDGNI
RAADRVELKK SAVLSGDIFT QRIMIEDGAY FKGAIDIQKA GTEPKPEPKK ETAAAAATNA
TNTFSSSSTF TPASQAPLIE TK