| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1574 |
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| Symbol | |
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| ID | 4069012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1922840 |
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| End bp | 1923499 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637983583 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_590650 |
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| Protein GI | 94968602 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.057142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0500809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAATCTC TCTTCAAAAG CCTTGTATTC CTGCTCTTGG CATCGTTGGC ATTCGCACAG
ACTGATATTA AGAAACTGGC CGAGGGCGTG GACCACCGCT ACAACGACCT CCGCTCCATG
AGTGCGCAGT TCTCCGAGCG CTACTCCGGC AACGGGATGG AACGAGAAGA GACTGGCACA
CTGTCGTTGA AGAAGCCGGG GAAAATGCGC TGGGAGTACC AAAGTCCACG CGAAAAGCTG
TTCGTTTCTG ACGGCAAATT GGCCTGGTTT TACGTGCCCG GCGAGAAGCA AGTCCGCCAG
GCGCAGGTCA AAAAATTGGA CGATCTGCGA TCGCCGCTAC GCTACTTACT CGGACATACC
AAGCTGGAAA AGGAATTCAC GGGACTTTCG CTGGCGCCGG ACGTCAAACC AGCGGTGGCG
GGCAATACGG TTTTGCGCGG CATTCCTGTA TCAATGGCGG ACCGCGTGAG CCAGGTGCTT
CTCGAGATCA CTCCGGAGCA TCGTATTGCG CGCATCGTGG TGAGCGAACT CGACGGCTCG
ACAACGGAGT TCACGTTCAG CCAGGAACAG GACAATCCCT CACTGGCGGA CAGTAGTTTC
GAATTCAAGC CGCCGGCGGG AGTGGAGATA CTGCAAGGCA GTGAATTGAC TGCGCCTTAA
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| Protein sequence | MKSLFKSLVF LLLASLAFAQ TDIKKLAEGV DHRYNDLRSM SAQFSERYSG NGMEREETGT
LSLKKPGKMR WEYQSPREKL FVSDGKLAWF YVPGEKQVRQ AQVKKLDDLR SPLRYLLGHT
KLEKEFTGLS LAPDVKPAVA GNTVLRGIPV SMADRVSQVL LEITPEHRIA RIVVSELDGS
TTEFTFSQEQ DNPSLADSSF EFKPPAGVEI LQGSELTAP
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