| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1469 |
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| Symbol | |
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| ID | 4069619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1777433 |
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| End bp | 1778485 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983478 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_590545 |
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| Protein GI | 94968497 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.11937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.330674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGAC TGGGAACAGC AAAGAGCATA GTTGGCCTGG ATATCGGATC CAGCAGCATC
AAGGCCGTGG AGTTAAAGAA GTCGCGCAAT GGCGTAGAAG TGGCGCACAT GGCCATGGAG
CCCCTGTCGT CTGACATCGT CGTGGACTCG ATGATTGTGG ACAGCGGCAG CGTCGCCAGC
GCAATTACCA AGATCTTTAC GGAGTCGGGC ATCAAGACTC GTGCGGTAGC GACCTCGGTC
AGCGGACACT CCGTGATCGT GAAGCGCATC CCGATGTCGA CGATGAGCGA CTCTGAACTT
TCCGGCATCA TCCAGACCGA AGCCGCGCAA CACATCCCGT TCGATATCTC GGACGTCAGC
ATTGACTACC AGATCCTTTC CGACACCGGT GGCTCGACGA TGGACGTCCT GCTGGTCGCG
GTGAAGAAAG ACAAAATTCT TAACTACACG AACGTTCTGT CGCTCGCCGG CAAGTCTCCG
GCGGTGGTGG ACATCGACGC GTTCGCCCTC CAGAACTGCT ACGAATACAA CTATCAACCC
GGTCCGGGCG CGACAGTTGC GTTGTTGAAT CTCGGCGCCA GCGTAATGAA CATCAACATC
GTGAAGGGCA CCACACCCCT GTTCACGCGC GATGTGAGCG TCGGCGGCCA CCAATACACC
GATTCGTTGC AGAAGGAACT GGATCTCAGC TTTGAAGACG CGGAAGCGCT GAAGCTCGGT
AAGAAAGTGG GCACAGTCAG CGAAGACGCG AAGATGCCGA TCCTCCAGCA AGTGACCGAA
ATCATCGTGC TGGAAATTCA GAAGACTTTC GACTTCTTCC GCGCTACCGC GACGGGAGAG
CACATTGAGC GCATTTACCT CGCGGGCGGT TCGTCGCAGG TGCCGGGCCT GATTGAAGGC
CTGCGCCAGG AGTTCTCGCT CCCAGTCGAG ATCCTCAATC CATTCCAGCG CATTGAACCG
CCTCTTGGCA CGGGCGCGGA TCTCGCCGAC AAGAACGCCG GCCAGATGGC AGTTGCCGTG
GGACTCGCCC TTAGGAGTTT TGACGAATTA TGA
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| Protein sequence | MFGLGTAKSI VGLDIGSSSI KAVELKKSRN GVEVAHMAME PLSSDIVVDS MIVDSGSVAS
AITKIFTESG IKTRAVATSV SGHSVIVKRI PMSTMSDSEL SGIIQTEAAQ HIPFDISDVS
IDYQILSDTG GSTMDVLLVA VKKDKILNYT NVLSLAGKSP AVVDIDAFAL QNCYEYNYQP
GPGATVALLN LGASVMNINI VKGTTPLFTR DVSVGGHQYT DSLQKELDLS FEDAEALKLG
KKVGTVSEDA KMPILQQVTE IIVLEIQKTF DFFRATATGE HIERIYLAGG SSQVPGLIEG
LRQEFSLPVE ILNPFQRIEP PLGTGADLAD KNAGQMAVAV GLALRSFDEL
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