| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1423 |
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| Symbol | ispG |
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| ID | 4068802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1722575 |
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| End bp | 1723816 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983432 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_590499 |
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| Protein GI | 94968451 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.412672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.223242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACGA TTTACCGCCG TAAAACTCCT GTTGTTCGCA TTGGAGACGT CTGGGTCGGC
AGCGACGCGC CGGTTGTGGT GCAGTCGATG ACCAACACCG ACACCGCCGA TGTGGACTCG
ACGATTAAGC AGTGTATCGC GCTTGCCCGC GCCGGGTCTG AGCTCATCCG CGTCACCGTG
AACAACGATG ACGCCGCCAA GGGCGTGCCG CATCTCGTTG ACGGCCTGGC CAAGATCGGC
ATCCATACGC CGATCATCGG CGATTTCCAC TACAACGGCC ACATCCTGCT GAAGAAATAT
CCCGACTGCG CGAAGGCGTT GGCGAAGTAC CGCATCAATC CCGGCAATGT GTCGATCGGT
CGCAAGGACG ACGACAACTT CAAGGCCATG GTGGACGTTG CGGTTGAGAA CCAGAAGCCC
GTCCGCATTG GCGTGAACTG GGGCTCGCTC GACCAGCAGC TTCTCGCGAA GATGATGGAC
CAGAACGCGA AGCTCGCTGA GCCGAAAGAA GCCCGTGACG TGATGATGGA AGCGATGATT
GTCTCCGCGC TGAATTCCGC GGCAATCGCC GAACGTTACG GCCTGCGTAA AGATCAGATC
ATCCTCAGCG CAAAGGTGAG CGGCGTACAG GATTTGATCG ACGTTTATCG CGATCTCGCC
AAGCGTTGCG ACTACGTGCT GCACCTCGGA TTGACCGAAG CAGGTATGGG AGCGAAGGGC
GTCGTGGCAT CGACGGCCGG TTTGTCAGTT CTTCTGCTCG AAGGCATTGG CGACACAATT
CGCGTCTCGC TTACGCCGAA GCCGAATGGC GATCGCACCG AAGAAGTTCT GGTCGCGCAG
CAGATTTTGC AATCGATGGC GATCCGCAGT TTCACACCGC AGGTGACAGC CTGCCCGGGT
TGCGGACGAA CCACTAGTAC CTTCTTCCAG GAACTCGCCG AGCGCATCCA GAACTACATT
CGCGAACAGA TGCCGCAGTG GAAGACCCGC TACACCGGCG TGGAAGAGAT GAAGGTCGCG
GTGATGGGCT GCGTGGTGAA TGGCCCCGGC GAATCGAAGC ACGCTAACAT CGGCATCTCG
CTGCCGGGCA CATTTGAGGA GCCGAAGGCG CCCGTGTACG TAGACGGCCG CCTGATGACG
ACGCTCAAGG GCGACAAGAT CGTCGAGGAG TTTACGACGA TTCTCAACGA GTACGTAGAC
AACCGATACG CAAAGAAGGC CGAAGAAGCG GTCGGCGTTT AA
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| Protein sequence | MPTIYRRKTP VVRIGDVWVG SDAPVVVQSM TNTDTADVDS TIKQCIALAR AGSELIRVTV
NNDDAAKGVP HLVDGLAKIG IHTPIIGDFH YNGHILLKKY PDCAKALAKY RINPGNVSIG
RKDDDNFKAM VDVAVENQKP VRIGVNWGSL DQQLLAKMMD QNAKLAEPKE ARDVMMEAMI
VSALNSAAIA ERYGLRKDQI ILSAKVSGVQ DLIDVYRDLA KRCDYVLHLG LTEAGMGAKG
VVASTAGLSV LLLEGIGDTI RVSLTPKPNG DRTEEVLVAQ QILQSMAIRS FTPQVTACPG
CGRTTSTFFQ ELAERIQNYI REQMPQWKTR YTGVEEMKVA VMGCVVNGPG ESKHANIGIS
LPGTFEEPKA PVYVDGRLMT TLKGDKIVEE FTTILNEYVD NRYAKKAEEA VGV
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