Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1388 |
Symbol | |
ID | 4068923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1683678 |
End bp | 1685069 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637983397 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_590464 |
Protein GI | 94968416 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0597975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA TACTTGTCTG CGACGACGAA CGTTCGATCT GCGAAATGCT GGAGATCGCC CTCCGCAAGG AAGGTCACAA GGTGGAAACC GTGACCAGCG GCGAAGCGGC CAAGCGTAAA CTCGACTCCG CTCTCTTCGA CGTCGTCGTC ACCGATATCC GCATGCCGCA AACCAACGGC ATCGAAGTCC TACGCCACGC CCACCAGATT TCGCCCGACA CCGCCGTGGT GCTCATCACC GCCGTTGATG ACATCGAGGC CGCCGTCGCC GCCGTGAAGG CCGGAGGCGC TGCCGACTAC ATTCGCAAGA GCCCATCGCT CATTGACGAT ATTCGTGTGG CGATCGGCAA CGCCGTTGAG CGCGGATCCC TGAAGCGCCA GAACCTCGCG TACAAGCGCG ACGCCGCGGG CCGCAATTCG CTCGACAACA TCGTGGGCAC CAGCCCCGCG ATGGGCAAGC TCAAGAACAC CATCCGCATG GTCGCATCTA CTGGATCAAC GGTGCTCATC CACGGCGAGA GCGGCACCGG CAAAGAGCTC GTTGCACGCG CAGTGCATAC GTGTTCGCCG CGCGCGGGCG AACCGTTCAC CTCGATCAAC TGCGGCGCGT TTCCAGAAAC GCTGCTCGAA AGCGAACTCT TCGGCTACGT CAAGGGCGCG TTCACCGGCG CGGTGCAGAA CAAGCGCGGC CTCTTCGAAG TCTCTACCGG CGGCACGATT TTCCTCGATG AAATCAGCGA GATGACGCTC ACCATGCAGG TGAAACTGCT ACGCGTGTTG CAGGAGCGCT GCATTCGTCC GGTTGGCGGC ACCAGCGAGA TTCCAGTGGA TGTGCGCGTG ATCGCCGCGA CGAACAAGAA CCTCGACGCA CAGGTTGCCG ACGGCGTGTT TCGCGAAGAT CTCTACTACA GACTCAGCGT GATTCCAGTG CAGGTGCCAC CGCTGCGGGA ACGGGTGGAT GATATTGAAT TGCTCGCGAA CCATTTCCTC AAGAAATACG CGCCGGCCGC GGGCAAAAGC ATTCGCGCCA TCCGTGTGGA ATCGCTCGGC GATTTGCGCG AGTACGATTG GCCGGGCAAT GTGCGGCAAC TTGAGAACAC CATCGAGCGC GCGGTTGCGC TGGAGATGAG CGACGTACTA CACGTCGAAA TTCCCACGGA GCGGCAGAAG AACAAACCTG CAGCAGCCGC TGCTGTCGCG GGTTTCAGCG GCAACGGGCA GGTTGCGATC AACGCCGATG GAATCGATAT GGAAGCGTAC GTTGCGAACA TCGAGCGCTC GCTCTTGCAG CAGGCGCTGA AGCAGGCGAA TGGTGTGCAG ACGAAAGCCG CTGATTTGCT CAAGCTTTCG TATCGCTCGT TCCGGCATTT GATGAAAAAG TACGAGCTCT AG
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Protein sequence | MSNILVCDDE RSICEMLEIA LRKEGHKVET VTSGEAAKRK LDSALFDVVV TDIRMPQTNG IEVLRHAHQI SPDTAVVLIT AVDDIEAAVA AVKAGGAADY IRKSPSLIDD IRVAIGNAVE RGSLKRQNLA YKRDAAGRNS LDNIVGTSPA MGKLKNTIRM VASTGSTVLI HGESGTGKEL VARAVHTCSP RAGEPFTSIN CGAFPETLLE SELFGYVKGA FTGAVQNKRG LFEVSTGGTI FLDEISEMTL TMQVKLLRVL QERCIRPVGG TSEIPVDVRV IAATNKNLDA QVADGVFRED LYYRLSVIPV QVPPLRERVD DIELLANHFL KKYAPAAGKS IRAIRVESLG DLREYDWPGN VRQLENTIER AVALEMSDVL HVEIPTERQK NKPAAAAAVA GFSGNGQVAI NADGIDMEAY VANIERSLLQ QALKQANGVQ TKAADLLKLS YRSFRHLMKK YEL
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