Gene Acid345_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1388 
Symbol 
ID4068923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1683678 
End bp1685069 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content60% 
IMG OID637983397 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_590464 
Protein GI94968416 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0597975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TACTTGTCTG CGACGACGAA CGTTCGATCT GCGAAATGCT GGAGATCGCC 
CTCCGCAAGG AAGGTCACAA GGTGGAAACC GTGACCAGCG GCGAAGCGGC CAAGCGTAAA
CTCGACTCCG CTCTCTTCGA CGTCGTCGTC ACCGATATCC GCATGCCGCA AACCAACGGC
ATCGAAGTCC TACGCCACGC CCACCAGATT TCGCCCGACA CCGCCGTGGT GCTCATCACC
GCCGTTGATG ACATCGAGGC CGCCGTCGCC GCCGTGAAGG CCGGAGGCGC TGCCGACTAC
ATTCGCAAGA GCCCATCGCT CATTGACGAT ATTCGTGTGG CGATCGGCAA CGCCGTTGAG
CGCGGATCCC TGAAGCGCCA GAACCTCGCG TACAAGCGCG ACGCCGCGGG CCGCAATTCG
CTCGACAACA TCGTGGGCAC CAGCCCCGCG ATGGGCAAGC TCAAGAACAC CATCCGCATG
GTCGCATCTA CTGGATCAAC GGTGCTCATC CACGGCGAGA GCGGCACCGG CAAAGAGCTC
GTTGCACGCG CAGTGCATAC GTGTTCGCCG CGCGCGGGCG AACCGTTCAC CTCGATCAAC
TGCGGCGCGT TTCCAGAAAC GCTGCTCGAA AGCGAACTCT TCGGCTACGT CAAGGGCGCG
TTCACCGGCG CGGTGCAGAA CAAGCGCGGC CTCTTCGAAG TCTCTACCGG CGGCACGATT
TTCCTCGATG AAATCAGCGA GATGACGCTC ACCATGCAGG TGAAACTGCT ACGCGTGTTG
CAGGAGCGCT GCATTCGTCC GGTTGGCGGC ACCAGCGAGA TTCCAGTGGA TGTGCGCGTG
ATCGCCGCGA CGAACAAGAA CCTCGACGCA CAGGTTGCCG ACGGCGTGTT TCGCGAAGAT
CTCTACTACA GACTCAGCGT GATTCCAGTG CAGGTGCCAC CGCTGCGGGA ACGGGTGGAT
GATATTGAAT TGCTCGCGAA CCATTTCCTC AAGAAATACG CGCCGGCCGC GGGCAAAAGC
ATTCGCGCCA TCCGTGTGGA ATCGCTCGGC GATTTGCGCG AGTACGATTG GCCGGGCAAT
GTGCGGCAAC TTGAGAACAC CATCGAGCGC GCGGTTGCGC TGGAGATGAG CGACGTACTA
CACGTCGAAA TTCCCACGGA GCGGCAGAAG AACAAACCTG CAGCAGCCGC TGCTGTCGCG
GGTTTCAGCG GCAACGGGCA GGTTGCGATC AACGCCGATG GAATCGATAT GGAAGCGTAC
GTTGCGAACA TCGAGCGCTC GCTCTTGCAG CAGGCGCTGA AGCAGGCGAA TGGTGTGCAG
ACGAAAGCCG CTGATTTGCT CAAGCTTTCG TATCGCTCGT TCCGGCATTT GATGAAAAAG
TACGAGCTCT AG
 
Protein sequence
MSNILVCDDE RSICEMLEIA LRKEGHKVET VTSGEAAKRK LDSALFDVVV TDIRMPQTNG 
IEVLRHAHQI SPDTAVVLIT AVDDIEAAVA AVKAGGAADY IRKSPSLIDD IRVAIGNAVE
RGSLKRQNLA YKRDAAGRNS LDNIVGTSPA MGKLKNTIRM VASTGSTVLI HGESGTGKEL
VARAVHTCSP RAGEPFTSIN CGAFPETLLE SELFGYVKGA FTGAVQNKRG LFEVSTGGTI
FLDEISEMTL TMQVKLLRVL QERCIRPVGG TSEIPVDVRV IAATNKNLDA QVADGVFRED
LYYRLSVIPV QVPPLRERVD DIELLANHFL KKYAPAAGKS IRAIRVESLG DLREYDWPGN
VRQLENTIER AVALEMSDVL HVEIPTERQK NKPAAAAAVA GFSGNGQVAI NADGIDMEAY
VANIERSLLQ QALKQANGVQ TKAADLLKLS YRSFRHLMKK YEL