| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1342 |
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| Symbol | |
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| ID | 4070880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1620361 |
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| End bp | 1620957 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983351 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_590418 |
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| Protein GI | 94968370 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.524179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTAG AGCCCGTTGT GCTGGAGCAA CTGAGCGACG CAGAAGTCAT GCTTCGCGTT
GCGCAGGGCG ACGACGCCGC CTTCGACTAC CTCGTCGATA AGTTCCGCCG GCCGATCATC
AGTTTCATGT ATCGGACCAC CCACAATCAG GCCACTGCTG AAGAGTTAGC GCAGGAAGTA
TTCTTGCGCG TGTATCGCTC TCGCGAGAGC TATGAGGCGA GCGCGAAGTT CACTACCTGG
CTTTATCGCA TTGCGACTAA CCTGGCCGTG AACAACGCCC GCGACACCAA GCACGAGCGC
GCCGAGGCCC AGGTAAGCCT CGACGAGCCA GACGAAGAGA GCGGGAGCAC AATGGATGTC
GCGGACAGCC GTCCGACGGT GGAGCAGGAA ATCCTCCGCA ACGAACGGAT GACGGCGATC
CGCAAAGTAG TAGAAGGTCT GCCGGAGCGG CAACGCATGG CAGTGCTCAT GCATAAGTAT
CAGAATATGG ATTACAAAGA GATCGCCGCA GTTCTGAAGT TGAGCGAGTC GGCGACCAAA
TCATTACTCT TCCGCGCCTA TGAAAGTTTG CGCGAGAGCT TGAAGCAGTA CTTATAG
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| Protein sequence | MALEPVVLEQ LSDAEVMLRV AQGDDAAFDY LVDKFRRPII SFMYRTTHNQ ATAEELAQEV
FLRVYRSRES YEASAKFTTW LYRIATNLAV NNARDTKHER AEAQVSLDEP DEESGSTMDV
ADSRPTVEQE ILRNERMTAI RKVVEGLPER QRMAVLMHKY QNMDYKEIAA VLKLSESATK
SLLFRAYESL RESLKQYL
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