| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1225 |
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| Symbol | rpsJ |
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| ID | 4072616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1511813 |
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| End bp | 1512184 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637983234 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_590301 |
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| Protein GI | 94968253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00268366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000899576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGAGAACGG CCGTTCCAGA CAGATCTTTG AGAGAAACTG ACGTGATTGG CAAAGAACGT
ATTCGGATCC GACTGAAGGC TTATGACTAC CGCGTTCTGG ACCAGTCCAC GGGAGAAATC
GTGGATACCG CCCGCCGTAC CGGCGCGCAG ATTGCGGGAC CGATTCCGCT ACCCACGGTG
AAGAACAAGT ATTGCGTTCT TCGCTCTCCC CACGTGGACA AGAAGAGCCG TGAGGCATTC
GAGATCCGCA CCCACAAGCG CTTGCTCGAC ATTCTCGAGC CGACGCAGCA GACCGTGGAT
GCGCTGATGA AACTCGACCT GCCCGCGGGC GTGGACGTGG AAATTAAGGC ATTCGGCAAG
GAACACAAGT AG
|
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| Protein sequence | MRTAVPDRSL RETDVIGKER IRIRLKAYDY RVLDQSTGEI VDTARRTGAQ IAGPIPLPTV
KNKYCVLRSP HVDKKSREAF EIRTHKRLLD ILEPTQQTVD ALMKLDLPAG VDVEIKAFGK
EHK
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