Gene Acid345_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_1218 
Symbol 
ID4068558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1501761 
End bp1502462 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID637983227 
ProductTonB-like protein 
Protein accessionYP_590294 
Protein GI94968246 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0834561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAA CCGCCTCTCT CCTCGGTTTC ACGCTCTGCG CTTGCGGTGC CTTGGCGCAG 
CTTCCCGACC TGCCGAAGAA CGTTCCCGGC GCAGTCACCA TGCAGCGCCT TAACGAGGCG
CCGACGAAAA CTGTAAAGCC GGTGTATCCG GATGTTGCTC TGCAGAAGTG GATACAAGGA
ACGGTGACGC TCGATGTGGT AATTAGCGCC GACGGAAAAG CAGAACAGAT CGGCTGCGAC
AGCTATTGCC AGATTTTCCC GCGGGAGATG GGCGAGGCCG CGGCGGACGC GGTGAAGCAA
TGGACGTGGA ACCCGGTGCT CGTGAAAGGT AAGGCGGCGC GGGTCAAGAC CAGGGTCGCA
GTGCAGTTTG CGCTCGATGA ACACAGCCCG CCGGTGGCCG TGTGCAATAT TGTGCGCGAC
CCGAAAACTT ATGTCGGCAA GGTGATGAAC GTTGTTGGAA TGGTGAAACG TGAGCACGGG
ATCAAGGTGC TTGTGTCCAG CGAGTGCAAT GGCGCGTTGG AAGTGGATGA TGACAATGCG
CTCACTCCTC CGCAGAAGGA CGCCAAATAC GCGGCGATGG AACAGGTGGT TGCCGCTGGC
AGCGGAGAAG TCACGGTACG CGGGTTGGTG CGCGATGAGA ACCGACCGGG AGCTTATCCG
GGATACCGCG TGATATTGGA GAGAGTACTG AAGGTGAAGT GA
 
Protein sequence
MLRTASLLGF TLCACGALAQ LPDLPKNVPG AVTMQRLNEA PTKTVKPVYP DVALQKWIQG 
TVTLDVVISA DGKAEQIGCD SYCQIFPREM GEAAADAVKQ WTWNPVLVKG KAARVKTRVA
VQFALDEHSP PVAVCNIVRD PKTYVGKVMN VVGMVKREHG IKVLVSSECN GALEVDDDNA
LTPPQKDAKY AAMEQVVAAG SGEVTVRGLV RDENRPGAYP GYRVILERVL KVK