Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1124 |
Symbol | |
ID | 4069239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1399813 |
End bp | 1402827 |
Gene Length | 3015 bp |
Protein Length | 1004 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637983133 |
Product | vitamin B12-dependent ribonucleotide reductase |
Protein accession | YP_590201 |
Protein GI | 94968153 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0740505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000199078 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGAAG CACCTAAATT AGCGATGAGC ACGGAAGCTC ACACCACCAC CTCCAACCCG ATCCCGGCCC CGAAGAAGAA AGCTCCGGGC CTGACCTTCA AGCGCGCCTT CACCAAGGCC GGCGTTTCGC CCTACGACGA AGTCGAGTGG GAGCTTCGCA CCGCCGCCAT TACTGACGCC CAGGGCAACA AGATCTTCGA GCAGCTCGAC GTCGAGACGC CCAAAGACTG GTCGATGACC GCCACCAACA TCGTCGCCAG CAAGTATCTG CACGGCACGC TCGGCACCAG CGAACGCGAG AGCGGCGTCC GCGCCCTGAT CGCCCGCGTA GCGGAGACCA TTACCCGCTG GGGCATTGAG GGCGGCTACT TCCGCACCTC CGACGACGCT GCCATCTTCC ACGACGAGCT CGTCCATCTC CTCGTCCAGC AGAAGATGGC CTTCAACTCT CCCGTGTGGT TCAACGTCGG TTGCGATCGC ATTGAGCCCC AGGCCGACGG CGCCAATTGG CACTGGAATT TCCTAAAGCA GCAAGCTGAG TTCGGACCGG TGGGTTATAC CCGTCCGCAA TGCTCCGCCT GCTTCATCAA CTCCGTGCAC GATTCGCTCG ACAGCATCCT GACGCTTGCC AAGACCGAAG GCATGCTCTT CAAGTGGGGT AGCGGTACCG GCACCAACCT CTCTCCGCTG CGCTCGAGCA ACGAGCAGCT CAGCGGCGGC GGCACTGCCA GCGGTCCGCT CAGCTTCATG CGCGGGTTCG ACGCCTTCGC CGGTGTCATC AAGTCCGGCG GTAAGACGCG TCGCGCCGCC AAGATGGTCA TCCTCAACAT CGAGCATCCC GACATCGTTG AGTTCATCGA TTGCAAGGCC AAGGAAGAAG CCAAGGCCTG GGCGCTCATG CAGCAGGGTT ACGACGGCTC CTCGCCTGAC GCCGAAGCTT ACAGCTCCAT TTTCTTCCAG AACGCCAACA ACAGCGTCCG CGTGACTGAC GACTTCATGT ACGCCGTAGT CCGCGACGCC GACTTCAGCA CCAAGGCCGT GAAGTCCGGC GATGTGGTCA AGACCTTCAA AGCCCGCTGG CTTCTCAGCA AGATCAGCGA AGCCACCTGG CAGTGTGGCG ATCCCGGCAT GCAGTACGAC ACCACGGTCA ATCGTTGGCA TACCAGCAAG AACACCGCGC GCATCAACGC TAGCAACCCT TGCAGCGAGT ACATGTTCCT CGACGACTCC GCCTGCAACC TCGCTTCGCT CAACCTGATG AAGTTCGCGC CCAACGGCAC CTTCGACGTC GCCGCCTACC GCCACGCCTG CGCCATCACC ATTACCGCGC AGGAGATCCT CGTCGACAAC GCCGGCTACC CCACCGAATC CATCATGAAG AACTCGCACG ACTATCGTCC GCTGGGCCTG GGCTACGCCA ACCTCGGCGC GCTGCTCATG GCCGCGGGTC TTCCCTACGA TAGCGATGCC GGCCGCGACT ACGCTGCCTG CGTCACTGCG ATCATGTGCG GCGAAGCGTA TCTCCAGTCA TCGAAGATCG CCGAACTCGG CCAGCCGTTA ACGCCTGCTA CGCCGATCAC GCAATCGGTC GAGATCACTG GCAGCGCCTG CCCCGGCTGG TATGTCAACC GCGAGCCTTT CCTCGACGTC ATTCGCATGC ACCGCGCCAG CGTCAACAAC ATCAACCAGA AGAACGTGCC CGCGCCCGTC TTCGAAGCTG CCAAGGCCAC CTGGGACGAA GCTCTCCAGC ACGGCGAGCG TCACGGCTAT CGCAACTCGC AGGTCACGGT CCTCGCGCCC ACCGGCACCA TCGGCTTCAT GATGGACTGC GACACTACTG GCATCGAGCC CGATCTCGCG CTCGTGAAAT ACAAGAAGCT GGTTGGCGGC GGCATGATCA AGATCGTGAA CAACACGGTC CCGGCTGCAC TCTTCAAGCT CGGATACACC AGCGACCAGG CCAACGCCAC CGTCAGCTAC ATTGACGCCA CCGGCACTAT CGAAGGCGCG CCGCACATCA AAGACGAGCA CCTCGCCGTC TTCGATTGCT CGTTCAAGCC CGCCAAGGGC ACGCGCACCA TCTCCTACAT GGGACACGTC AAGATGATGG CCGCGACTCA GCCCTTCATC TCCGGCGCCA TCTCCAAGAC CGTCAATCTA CCGAAAGACG CCACCATTGA CGACATCATG GAGGCCTACA TCCAGAGCTG GAAGCTCGGC CTGAAAGCGG TCGCCATCTA TCGCGACGGC TCCAAGGGCG GCCAGCCGCT GAATGCCTCC GGCACTAGCA CCACAGACAA GCTAAAGAAG GCCGAAGCCG CACCGGTCGC CTCCGAGTCC GAGGACGATG CCGCAGCTCC ACCGCGCGCC ATCCGCCATC GCCTCCCCGA CGAGCGCCTC TCCGTCACCC ACAAATTCAA CATCGGTGGA CACGAGGGCT ACATCACCGT CGGCCTCTAC AAAGACGGCA TGCCCGGCGA AGTCTTCATT ACCATGGCCA AGGAAGGCAG CACCGTCAGC GGCCTCATGG ACAGCTTCGC CTGCGCCACG TCCCTCGCCC TGCAGCACGG CGTCCCGCTC AAGCTGCTCT GCGAAAAATT CGCCCACACC CGCTTCGAGC CCAGCGGCTG GAGCCATAAT CCCGACATCG GCTTCGCCAA GTCGATCATG GATTACATCT TCCGCTGGCT CCAACTGCGC TTCCTAACCG GCCAGCAGCA GGCCCTGTTC GAAGGCCTCC GCCCCAAATA CATGATGGGC ACACCGTCAT CCAGCGACGC CTCCAGTTCA TCTGTCATCC TGAGCGAAGG CGCACCAGCG CCGGAGTCGA AGGACCCCTA TCGCTACACG CCACCCGGAG GCCCGGTCGC ACACCACGTC CACACCGCCG ACGCCCTGAA AGACCTGATC GATCTAGGCG ATGCCCCCAG CTGCCACGTC TGCGGCGCCA TCATGACCCG CAACGGAAGC TGCTACCGCT GCAATGAATG CGGAAGTACG AGTGGGTGCT CGTAG
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Protein sequence | MAEAPKLAMS TEAHTTTSNP IPAPKKKAPG LTFKRAFTKA GVSPYDEVEW ELRTAAITDA QGNKIFEQLD VETPKDWSMT ATNIVASKYL HGTLGTSERE SGVRALIARV AETITRWGIE GGYFRTSDDA AIFHDELVHL LVQQKMAFNS PVWFNVGCDR IEPQADGANW HWNFLKQQAE FGPVGYTRPQ CSACFINSVH DSLDSILTLA KTEGMLFKWG SGTGTNLSPL RSSNEQLSGG GTASGPLSFM RGFDAFAGVI KSGGKTRRAA KMVILNIEHP DIVEFIDCKA KEEAKAWALM QQGYDGSSPD AEAYSSIFFQ NANNSVRVTD DFMYAVVRDA DFSTKAVKSG DVVKTFKARW LLSKISEATW QCGDPGMQYD TTVNRWHTSK NTARINASNP CSEYMFLDDS ACNLASLNLM KFAPNGTFDV AAYRHACAIT ITAQEILVDN AGYPTESIMK NSHDYRPLGL GYANLGALLM AAGLPYDSDA GRDYAACVTA IMCGEAYLQS SKIAELGQPL TPATPITQSV EITGSACPGW YVNREPFLDV IRMHRASVNN INQKNVPAPV FEAAKATWDE ALQHGERHGY RNSQVTVLAP TGTIGFMMDC DTTGIEPDLA LVKYKKLVGG GMIKIVNNTV PAALFKLGYT SDQANATVSY IDATGTIEGA PHIKDEHLAV FDCSFKPAKG TRTISYMGHV KMMAATQPFI SGAISKTVNL PKDATIDDIM EAYIQSWKLG LKAVAIYRDG SKGGQPLNAS GTSTTDKLKK AEAAPVASES EDDAAAPPRA IRHRLPDERL SVTHKFNIGG HEGYITVGLY KDGMPGEVFI TMAKEGSTVS GLMDSFACAT SLALQHGVPL KLLCEKFAHT RFEPSGWSHN PDIGFAKSIM DYIFRWLQLR FLTGQQQALF EGLRPKYMMG TPSSSDASSS SVILSEGAPA PESKDPYRYT PPGGPVAHHV HTADALKDLI DLGDAPSCHV CGAIMTRNGS CYRCNECGST SGCS
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