Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0942 |
Symbol | |
ID | 4070824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1199905 |
End bp | 1201305 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982949 |
Product | glutamate dehydrogenase |
Protein accession | YP_590019 |
Protein GI | 94967971 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.156047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGT CAACGATGAT TCCCGGCGCC ATCGCGACGC CGCGGACCTA CGTCAACGAA GTATTGGCAC TGGTAAAAGC GAAAAACCCT GCCGAAAAGG AATTCCACCA GGCAGTCCAG GAAGTGTTGG AATCTCTGAT CCCCGCACTC GAGCGTCATC CTGAATACAT CAGCCACAAG ATCCTTGAGC GCGTCACCGA ACCCGAGCGC CTCCTCATGT TCCGCGTTCC CTGGTTCGAC GACAAGGGCG AGATCCAGGT CAATCGCGGC TTCCGCATTG AGATGAACAG CGCCATCGGC CCCTACAAAG GCGGCTTACG CTTCCATCCT TCGGTGAACC TCGGCATTTT GAAGTTCCTG GCTTTCGAAC AGGTATTCAA GAACTCGCTC ACCACGCTGC CCATGGGCGG CGGCAAGGGC GGATCGGACT TCGATCCGAA AGGCAAGAGC GACAACGAAG TGATGCGTTT CTGCCAGAGC TTCATGACCG AATTGCAACG CCACATCGGC CCCGACACAG ACGTGCCGGC GGGCGACATC GGCGTGGGCG GCCGTGAAAT CGGCTTCCTC TTCGGGCAGT ACAAGCGGCT GCGCAACGAA TTCACCGGCG TCCTCACCGG CAAGGGCTTG AACTGGGGCG GCTCGTTGAT TCGTCCGGAA GCCACCGGCT ACGGCTGCGT GTACTTTGCG GAAGAAATGT TGAAGACCGT GAAGCAGACG CTCGAAGGCA AGGTTTGCCT GGTCAGCGGC AGCGGCAACG TGTCGCAATA CACCATTGAG AAGCTGCTCG ATCTCGGCGC GAAGCCGATC GCTTGCAGTG ATTCGAACGG CATCATTCAC GATCCGGCCG GCATCGATCG CGAAAAACTG GCGTACATCC TCGACCTGAA GAACACCAAG CGCGGCCGCA TCAGCGACTA CGCCGAGAAG TTCAAGACGG CGAAGTACAT CCCGGTCGAT CCGAAGCTCG ATCACAACCC GCTGTGGGAC ATCAAGGCCG ATTGCGCATT CCCGAGCGCC ACGCAGAATG AGATCAACGC GAAGGACGCG AAGAACCTCA TTAAGAATGG CTGCAAGGTC GTCAGCGAAG GCGCCAACAT GCCGAGCACG CTCGAAGCCA CGAACCTGTT CCTCGAAGCG GGCGTACTGT ACGGACCGGC AAAGGCTGCG AATGCGGGCG GCGTTGCCAC CTCAGGCCTC GAGATGGCGC AGAACAGCGC GCGCTTGGCC TGGACGCGCG AAGAAGTTGA CCATCGCCTC CACAACATCA TGATCGCCAT CCACAAGAAC TGCTTCGAGA CTGCCGAGAA GTACGGCAAG CCGGGCAATC TGGTGGTCGG CGCCAACATC GGCGGCTTCC TGAAGATTGC CGACTCGATG CTGGATCAAG GCTTGGTGTA G
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Protein sequence | MSLSTMIPGA IATPRTYVNE VLALVKAKNP AEKEFHQAVQ EVLESLIPAL ERHPEYISHK ILERVTEPER LLMFRVPWFD DKGEIQVNRG FRIEMNSAIG PYKGGLRFHP SVNLGILKFL AFEQVFKNSL TTLPMGGGKG GSDFDPKGKS DNEVMRFCQS FMTELQRHIG PDTDVPAGDI GVGGREIGFL FGQYKRLRNE FTGVLTGKGL NWGGSLIRPE ATGYGCVYFA EEMLKTVKQT LEGKVCLVSG SGNVSQYTIE KLLDLGAKPI ACSDSNGIIH DPAGIDREKL AYILDLKNTK RGRISDYAEK FKTAKYIPVD PKLDHNPLWD IKADCAFPSA TQNEINAKDA KNLIKNGCKV VSEGANMPST LEATNLFLEA GVLYGPAKAA NAGGVATSGL EMAQNSARLA WTREEVDHRL HNIMIAIHKN CFETAEKYGK PGNLVVGANI GGFLKIADSM LDQGLV
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