Gene Acid345_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0938 
Symbol 
ID4070820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1194386 
End bp1195846 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content60% 
IMG OID637982945 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_590015 
Protein GI94967967 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0161289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAA ACACCTCCAT CGCCGCCAAG CTCACGTGGA TGAACATCGC GGTCACCACG 
GTCGCGCTGC TCGTCGCTTC CGTCGGCTTC CTCTTCTATG ACCAGTCGAA CGCGCGCACT
AGTCTTGTCA CCAGTTTGTC CACACAGGCA CAGATCATCG CCGCGAACAG TGTCTCGGCA
CTCGAGTTCA ACGATCCCGA GTCGGCCCGC CAAACTCTCC GAGCGCTTGC CGCGTCGCCA
AACGTCGAAG GTGCGGGCCT GCTCACGCCG GACGGCCAGC TGTTCGCCGA GTACTGGCGC
AGTGCCGACG TTCGCGTGAA CGTGCTGCCA TCGTTATCAC CCGACAAGCA GCAAACCGTA
CTGTTCTTCA GTGAGAAGGT TACGGTCATC CGCAACATTG ACTTCGGCGG ACGCCGCATT
GGCGCCATCT ACATCCGCTC GAACCTCAGC TCGCTCAATG AGCGCCGCAA TCGCTTCCTG
AAGATTCTCT TCTTCGTACT GCTCGCCTGC ATGGGCGCGG CTTTGATTGT CTCGTGGCTC
TTCCGGCGCA CGGTTGCGGG GCCGATCGCG GAACTGGCCG ACACCGCGAT GAAGGTGTCG
CGGGAGAAGA ATTACTCGCT ACGCGCGCAA CCAAGCTTGG CGCACGACGA ACTCTCCACG
CTCATCACCG CTTTCAACGA GATGCTGTCG CAAATCCAGG TGCGCGATGC CGCGCTGCTC
AGCGCGCGCA GCGAACTCGA ACTGCGCGTG CAGGACCGCA CCAAGCAGTT GGTCGCAGCG
AACCGCGACC TCGAGGCGTT CTCCTACTCG GTTTCTCACG ATCTCCGCGG GCCGCTCGAA
GTCGTGAATG GAATGAGCTA CATCATTCAC CTGCAATACG GCAACGAGCT CTCGCCGGGA
TTGAAGGACT GCCTCGACCG CATCGATGAC GCCTCGAAGC GCATGAACGA ACTGATCGAA
GACCTGCTCA ATCTCGCGCG CGTCACCAAG AGCGAGATGC ACCGCGAGCG CGTGGACGTC
TCCGCGATGG CGCGGGAGAT CTTCGCCGAA CTCAAACAAC GCCATCCGCA GCGCGTGGTG
GAAATCGTCG TTGCATCCGA TGCGATCGTG GTGGGCGACG CGCATTTACT TCGCGTGGCG
ATGGATAATT TAATCGGCAA CGCGTGGAAA TATTCTTCCA ACAAATCACC GAGCAAAATC
GAATTTGGCG TTCGACGTGC GAATGGCACC CCGGTGTACT TCATCAAGGA CAACGGTGCC
GGCTTCGATC CGCGCGGGAT GCAGCGTCTC TTCCAACCAT TCCAGCGGTT GCATCCGCTA
TCGGAGTTTC CTGGGACGGG CGTCGGTCTT GCCACCGTGC AACGCATTAT TCAAAAACAC
GGTGGACGCA TCTGGGCCGA AGGTGCCGTG AACGAAGGCG CTACTTTTTC CTTCACCCTC
GACAACGCTC CGGAATCCTA G
 
Protein sequence
MPTNTSIAAK LTWMNIAVTT VALLVASVGF LFYDQSNART SLVTSLSTQA QIIAANSVSA 
LEFNDPESAR QTLRALAASP NVEGAGLLTP DGQLFAEYWR SADVRVNVLP SLSPDKQQTV
LFFSEKVTVI RNIDFGGRRI GAIYIRSNLS SLNERRNRFL KILFFVLLAC MGAALIVSWL
FRRTVAGPIA ELADTAMKVS REKNYSLRAQ PSLAHDELST LITAFNEMLS QIQVRDAALL
SARSELELRV QDRTKQLVAA NRDLEAFSYS VSHDLRGPLE VVNGMSYIIH LQYGNELSPG
LKDCLDRIDD ASKRMNELIE DLLNLARVTK SEMHRERVDV SAMAREIFAE LKQRHPQRVV
EIVVASDAIV VGDAHLLRVA MDNLIGNAWK YSSNKSPSKI EFGVRRANGT PVYFIKDNGA
GFDPRGMQRL FQPFQRLHPL SEFPGTGVGL ATVQRIIQKH GGRIWAEGAV NEGATFSFTL
DNAPES