| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0934 |
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| Symbol | |
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| ID | 4070586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1187429 |
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| End bp | 1188829 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982941 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_590011 |
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| Protein GI | 94967963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000218274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000132275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCCTC TCGACCTCAG CCCCGCAGAT TTCCGCGCCC TTTCCCGCAA AATCTCCGAT
TTCACCGCCG ATTACCTGGA ACGTCTCCCG AATCTACCTG CCTTCCCGCT AAACGTCTCC
GGCGAGGCGG TAAATGCTCT CTTTTCCGCG GAAGTCCCGA TCGCACCTAT GGGCGAACGC
GCCTTCGATC CGCTGGCGGA CGTATTCGCC TTGTCGAGGC CAAACTCCCC GCGTTTCTTC
GGATACGTCT TCGGTTCCGG CCTCCCGATC GCCGCGCTTG GTGACTTCGC CGCAAGCGTT
TTGAACCAGA ACGTCACCGC CTGGCGCTCC GGTCCAGCCG CCGTGACCAT CGAACGCACC
GTCGTTGGCT GGCTCGCCGA AGCCATCGGT TGTTCTGGGT TTTCCGGCAG CCTCACCGGC
GGAGGCTCAC AAGCCAACCT CATGGCTCTT TGCATGGCCC GCGAAGCGAA AGCGCCCGCC
AACGAAAACG GAGCCCAAGG TGGAGTGATC TATTGCTCCG ACGAAGCTCA CATGTCCATG
CCGAAAGCCG CGATGATGCT CGGCCTTGGT CAGAAGAATG TCCGCCGTAT CCCAGTGAAT
GATCGCTTCC AGATGGACAT CAGTCATCTA CGTGACGCAA TCATGCGTGA TCTCCGGGAA
GGGAATCGTC CCATCGCCGT TGTCGCCAGC GCTGGAACCG TTGCTACCGG CAGTATCGAT
CCTCTGCCCG AGATTGCCGA CATCTGCTCC GAACACAACC TCTGGATGCA CGTGGACGGC
GCCTACGGCG CACTCGCTGC AATGACAGTT CCCGAAAAAT TCGTTGGACT GAATCGTGCT
GACTCGCTCT CCCTCGACCC GCATAAGTGG CTCTACCAGC CTGCGGGTTG CGGATGTCTC
CTCTACCGCG ATCCTGCCGC CGCGCAACGC GCGTTCTCGC ATACCGAAGA CTACGCACGC
TCCCTTTCGA CTGACCCCAT CGAAAGCTTC GCGTTCTTCG AATCGTCCAT GGAACTTTCG
CGGCCGTTTC GCGCGTTGAA GATATGGCTT TCGCTCCGCT ACTTCGGGCT TCAGGCATTC
CAGCAGCGCA TCGCCGAAGA CCTTCGCCTT GCCCGCATTC TCGCCGACTC CGTTTCCGCC
GAGCCGCAAC TCGAACTTCT CGCCCCCGTT GAGCTAAGCG CTGTTTGTTT TCGCTATGTG
AGGAAAAATG CCGATCTCGA CCACCTGAAC CTCGAGATTC TTCAGCGCAT CATTCAACGA
GGGAAGGTCT GCATCTCGAA CGCAACCATT CGTGGCCAGT TCGCTCTCCG CGCCTGCGTC
GTGAATCATC GCAGCACGGA GGAAGACGTT AAGGCTGTCG TAAGTGAGGT CCTACATGCT
GCGAATGAAG TGAGCGGATG A
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| Protein sequence | MAPLDLSPAD FRALSRKISD FTADYLERLP NLPAFPLNVS GEAVNALFSA EVPIAPMGER
AFDPLADVFA LSRPNSPRFF GYVFGSGLPI AALGDFAASV LNQNVTAWRS GPAAVTIERT
VVGWLAEAIG CSGFSGSLTG GGSQANLMAL CMAREAKAPA NENGAQGGVI YCSDEAHMSM
PKAAMMLGLG QKNVRRIPVN DRFQMDISHL RDAIMRDLRE GNRPIAVVAS AGTVATGSID
PLPEIADICS EHNLWMHVDG AYGALAAMTV PEKFVGLNRA DSLSLDPHKW LYQPAGCGCL
LYRDPAAAQR AFSHTEDYAR SLSTDPIESF AFFESSMELS RPFRALKIWL SLRYFGLQAF
QQRIAEDLRL ARILADSVSA EPQLELLAPV ELSAVCFRYV RKNADLDHLN LEILQRIIQR
GKVCISNATI RGQFALRACV VNHRSTEEDV KAVVSEVLHA ANEVSG
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