| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0905 |
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| Symbol | |
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| ID | 4069116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1133922 |
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| End bp | 1135124 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982912 |
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| Product | ABC sugar transporter, inner membrane subunit |
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| Protein accession | YP_589982 |
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| Protein GI | 94967934 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0660544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA ACAATCGTGC AGTAGCCACG AGTGTGCAAA TTGTTGAGGC TGGAAGGACG
AGCAATCTTC CGCCGCAAGT GAAGTTCGGT GCAACCGCGC GAGCTTACAC GATGGCGGCT
GCGCTGGTGG CGATTTGGAT CGTGTTCGAA TACACCACTC ACGGCGTATT CCTGAATGCG
CGCAACTTTT CAAACCTCAC GCGACAGATG GCTGTCACCG GTGTGCTCTC TGTGGGCATG
CTGATGGTGA TCGTGATTGG CGAAATCGAT TTGTCCGTTG GATCGCTAGT TGGTCTAACA
GGGATGGCTG CAGCGCTCGT CCAGGCAAAC AACGCCTGGG GTGTGACCGC GACCTTGACC
ATCGCTCTTG TCTTTGGCCT GATCATTGGC TGCGCACAGG GAATCCTCAC TTCGTACGCT
CGCGTTCCGT CCTTCATCGT GACTCTCGGA GGACTGCTTG CTTGGCGCGG CGTAACAAAA
GCGATCAGTG CGGGCCAGAC GATTCCAATC CAACTGTACA ATTTCAACTC AATCGGCCAA
TCCTATCTGG ACAAACCGAT CGGCTGGGCG TTCGCTGCTC TGGCGGTGGT AGCGATTATC
GTCACGCAGC TTCGCTGGCA GTCCTCGCGC AAGCGCCTTG GACTATCAAC TCTTTCGAGT
ACGCAGCTTG CACTTCGCAT CGGTATTCCC TCGGTTTTGT CCGTGGCCCT GGTTGCTATG
CTCAACGCGT ATGAAGGAAT CCCTGTACCC GTCCTATTGT TCCTGATTGT CGCCCTTGCT
GGCGCCTTTG TTATGTCAAA CACAACCTGG GGACGTTACA TGTACGCCGT CGGCGGGAAC
CGTGAAGCTG CGCGCCTCTC CGGCATCAAC ACTCGCGCGC TGACCATTGC GACATTCGGC
GTACTGGGAT TGCTCGCTGG GTTGGCAGGC GTAATCTATA CCGCGCGCGT CGGAAGCGCA
TCGCCTGACG CTGGACTTCT GCTTGAACTG GATGCCATTG CGGCGTGCGT TATCGGCGGG
GCCAGCTTGA TGGGCGGGCG CGGTACCATA GCGGGCGCAT GCATGGGCGC GCTGTTCATG
GCGAGCCTGG ACAATGGGAT GTCGCTGAAA AACGTTCCCG ATTTTACGCA AGATATCGTG
AAGGGCACCA TTCTCGTTGC CGCTGTTGCG CTCGACATGC TCAGCCGCAA GCGCAACGGA
TAG
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| Protein sequence | MSGNNRAVAT SVQIVEAGRT SNLPPQVKFG ATARAYTMAA ALVAIWIVFE YTTHGVFLNA
RNFSNLTRQM AVTGVLSVGM LMVIVIGEID LSVGSLVGLT GMAAALVQAN NAWGVTATLT
IALVFGLIIG CAQGILTSYA RVPSFIVTLG GLLAWRGVTK AISAGQTIPI QLYNFNSIGQ
SYLDKPIGWA FAALAVVAII VTQLRWQSSR KRLGLSTLSS TQLALRIGIP SVLSVALVAM
LNAYEGIPVP VLLFLIVALA GAFVMSNTTW GRYMYAVGGN REAARLSGIN TRALTIATFG
VLGLLAGLAG VIYTARVGSA SPDAGLLLEL DAIAACVIGG ASLMGGRGTI AGACMGALFM
ASLDNGMSLK NVPDFTQDIV KGTILVAAVA LDMLSRKRNG
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