Gene Acid345_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0892 
Symbol 
ID4069142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1112116 
End bp1112955 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content52% 
IMG OID637982899 
Productglycosyl transferase family protein 
Protein accessionYP_589969 
Protein GI94967921 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0398957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC CATCCATCAG CATCGTCACA CCGTCATTGA ATCAAGGGCC ATTCTTACGC 
GAATGTCTCA AGAGTGTAGC GAAACAGGGC ATTTCTGTAA TCGAACACAT CGTGATGGAT
GGGGATTCAA CAGATGACTC CATGGAAACA CTGAAAGCAT TTGAGGCGGA ATGCCGCTAC
CCGCTGCGAT GGCAATCCAA GCGCGACAGA GGCCAGAGTG ACGCTATCAA CAAGGGCTTT
AAAGAGGCCA AGGGCGAGAT TATCGGGTGG CTCAATGCAG ATGACCGTTA CCGCCCCGGT
GCTTTTTCGG CGGTGCTAGA TGCATTTCGG AAACACCCGG AAACGGATGT CTTATATGGC
GATTACACGT GGATTGACGC GGACGGCGAA ACCGTCCAAC AGCGCCGCGA AATCGGGTTC
AGCCCGTTCG TGCTTCTGTA TCACCGCGTC CTTTACATTC AAACGACCGC AATGTTCTTT
CACCGGCGAG TCCTTGATGC CGGCTACTGT TTAGACGAGA GTCTGCATTA CGCAATGGAT
TTCGAGTTCT TCGTGCGGCT CAGTGCGAGT CGTCACCGAT TTCTACATGT TCCGGTGTTC
CTGGGTGATT TTCGATTTCA GCCGAAAAGC AAGACAACAC TTCATCCCGA GAGACAGTTG
CAGGAGCAAA CAGACATCAT GCAACTGTAC TCACCAGTAT TTCGACACTG TCCTCGTGGG
ATGTTCGCTA CCGGGATGAC ATTCGGCCTA CGTACTGCGG CCGCGATTCG AAGGTATAGC
GAGAAAGCCG TTCGCGGCTA TTACTTGACG CAATTTCGAA CCGCCGCACC AACTGACTAG
 
Protein sequence
MSNPSISIVT PSLNQGPFLR ECLKSVAKQG ISVIEHIVMD GDSTDDSMET LKAFEAECRY 
PLRWQSKRDR GQSDAINKGF KEAKGEIIGW LNADDRYRPG AFSAVLDAFR KHPETDVLYG
DYTWIDADGE TVQQRREIGF SPFVLLYHRV LYIQTTAMFF HRRVLDAGYC LDESLHYAMD
FEFFVRLSAS RHRFLHVPVF LGDFRFQPKS KTTLHPERQL QEQTDIMQLY SPVFRHCPRG
MFATGMTFGL RTAAAIRRYS EKAVRGYYLT QFRTAAPTD