Gene Acid345_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0871 
Symbol 
ID4068964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp1086937 
End bp1087692 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID637982878 
Producthypothetical protein 
Protein accessionYP_589948 
Protein GI94967900 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGCG TTTCGAATCC ATGGCAGGAG AAGATCGATC GGGCGAAAGC CCTCATAACT 
CAATCCGACG CGGCCGCTGA GATCCTACGG TTTTACGCTG ATATTGTCGG ATTCCAGGAA
ACGGTATACA GCGCGCTCGA TGATCGACAT CGAATGCCCG AAGCCATGGC CGCTTTCATC
CCTGGAATGC TCGCACTGAT GGCGACACGG GGAACGTTCC AACTTAAACA AATTGCAGAC
TTTGCGCGCG AACTCGAATG GGCTGATGAG CTAAGTTCCT ATTGGAAGGA ACGAGTTACG
GCGACCTACA CGCCTATATC GTTAATATCG CAATCAATCC TTCAGCCTTT TGCGCGAAAA
CTTGCTACGA CTGTTAATCG ACAGGAAAGC TGGTTAAAGC CGGAATGTCC TGTTTGCGGA
TGTTTACCGC AACTGGCGGT TTTGCGCCCT GAGGGCGATG GGGCCAAACG ACACCTGCTT
TGCGGACTGT GCAGAACGGA GTGGGAATAT CGTCGTGTGA TCTGCGTGTA CTGCGGAGAA
CTCGATAAGG AGAAGTTGCC TGTTTTTACC AACGAGCTCA CACTCCACGT AAGGACATCG
GGTTGCGATA CGTGCCGTAG ATACCTCAAA TGCGTTGACC TTAGCGTAGA CGGTCATGCC
GTTCCAGAGG TGGAGGACAT AGCTACACTA GCCGTCAGCG TTTGGATGAT CGAGCAGGGA
TTTCAGCCGA TCAGAGCGAA TCTTTTCGGA TTTTGA
 
Protein sequence
MRGVSNPWQE KIDRAKALIT QSDAAAEILR FYADIVGFQE TVYSALDDRH RMPEAMAAFI 
PGMLALMATR GTFQLKQIAD FARELEWADE LSSYWKERVT ATYTPISLIS QSILQPFARK
LATTVNRQES WLKPECPVCG CLPQLAVLRP EGDGAKRHLL CGLCRTEWEY RRVICVYCGE
LDKEKLPVFT NELTLHVRTS GCDTCRRYLK CVDLSVDGHA VPEVEDIATL AVSVWMIEQG
FQPIRANLFG F