| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0823 |
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| Symbol | |
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| ID | 4072349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1021736 |
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| End bp | 1023244 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982832 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_589902 |
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| Protein GI | 94967854 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGTCA TCGTCATCCC GAGGGACTTT TCCACCCGCC CGCGGTCTGT TTCGCGATGG
CATCTCTGGT TGTTCCCACT CGTCACGCTT GCGGTGGCTC TCCGGCTTCC ATCCGGCGCT
GCGGCGCAGG CGAAGCCATC CAAGCCCATC GTCAAAGCCA ATGCCAGCGC CTCGCAAGCA
GAAGTGGAGC TCGCCCGACG CATCAAGACC GCGGATGCCG CTCGCGCATC CGGGAATACG
AAAGCTATCG GAGACGCCAA CCGGAAAGTC ATAGCACTCG CTTTACGGGA ACTTGGACAT
CTGCGCTTGA GCGAACTCCT CTCTGCCCAG GCCGTCGAGC TATATCGCAA TTCTCTGAGC
TTCGAGGATG CAGTCGATTC GCGGGCGGAT TTGGCAAACG CGATCAACAC CGAGGCGAAA
GCGAAGACCA CTCCCACATC GCCGCCTGAC GCCGATCCAT TCGCGAGACC GGACGCCTCC
ACCTTCTCAC GCGCCAAGCT CTCTCCGGAG CAACGTACAG CTGCCGAAGG CAAGGAGATC
CAGCTTCGCC TCGTCCTTGG CGCGAGTCTT AACGATCTCG CGACCTCTGA GGCGGCGCGC
AATCAGTACG GCATGGCGCT CACACATCTC CAGCAGGCTG AGAAGTGGAA CTCGGCGACC
ACTGGCCTGG CAAGAAATCT CGGCTTCTGT GCGTTCAAGG TGGGTGACTA CCCTGAGGCG
ATTCGTACGC TTTCCCGTGC TCTCGAAGAA CAGCCGCAAG ATGCTCCCGT TCGGGCGATG
CTTGGCATGT CGTATTTCGG GAGCAACAAA TATGCAGACG CCGCGAAAAC CTTCGAGCCG
CTCGGTGATC GTGGGATGCA GGATACCTCC GTCGGTTACG CCTGGGCGAC ATCGCTCGCT
CGGACTGGCG ATCTGAAGAA AGCCGCGGAC GTACTGAATC ACTTCGAGAA CTCCAATCTC
TCCCCGGATG CATTACTTCT GGTGGGCCAG CTTTGGACAG AGATGACCGA TTACCAGCAC
GCGGTATCGG TTTTCCAGAA AGTTTTGCTG CGGGACCCTT CGTTGCCGAA GGCGCACTTT
TTTGAAGGAT TGGCATATCT GAAGTGGGAG AAGTGGAACG AGGCCGCCTC CGACTTCCAG
GCGGAACTCG CACTGGTTCC GGGCGACCTC GACGCGAAAT ACACTCTTGG TTTTATTCGT
CTGCAGCAAG GCCGCGTAGA CGAAGCACTG GCGTTCTTCA ACGAAGTTCT GGCTGCAGAG
CCCAATCACG CGAACGCCCA ATATCAGATC GGCAAGATCA TGCTGGATCG CGGGCGACTG
GACGATGCCA TCACCCACTT GGAAATCGCA GCCCGTCTTG ATCCCCAGGC AGACTATATT
CACTACCAGC TCCAAGTTGC GTATCGGAAG CGCTCGCGAA TTGCCGAGGC GGACCGCGAA
CTGGAAATCT ATAAGCAGCT GAAGTCCCAG GCGCGCGAAC AGTCGTCTTC GCCCAAGCAG
AATCCTTAG
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| Protein sequence | MQVIVIPRDF STRPRSVSRW HLWLFPLVTL AVALRLPSGA AAQAKPSKPI VKANASASQA
EVELARRIKT ADAARASGNT KAIGDANRKV IALALRELGH LRLSELLSAQ AVELYRNSLS
FEDAVDSRAD LANAINTEAK AKTTPTSPPD ADPFARPDAS TFSRAKLSPE QRTAAEGKEI
QLRLVLGASL NDLATSEAAR NQYGMALTHL QQAEKWNSAT TGLARNLGFC AFKVGDYPEA
IRTLSRALEE QPQDAPVRAM LGMSYFGSNK YADAAKTFEP LGDRGMQDTS VGYAWATSLA
RTGDLKKAAD VLNHFENSNL SPDALLLVGQ LWTEMTDYQH AVSVFQKVLL RDPSLPKAHF
FEGLAYLKWE KWNEAASDFQ AELALVPGDL DAKYTLGFIR LQQGRVDEAL AFFNEVLAAE
PNHANAQYQI GKIMLDRGRL DDAITHLEIA ARLDPQADYI HYQLQVAYRK RSRIAEADRE
LEIYKQLKSQ AREQSSSPKQ NP
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