| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0779 |
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| Symbol | |
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| ID | 4069524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 961481 |
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| End bp | 963307 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982785 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_589858 |
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| Protein GI | 94967810 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.991922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.120219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG AGGAATACAA AAAGAAACGT CGCTTTACTG ACACCCCCGA GCCTCCACCC
TCGATCGACA AAAGCAAAGG TCATCGCTTC GTGGTGCAGA AGCACCACGC CTCACGTCTC
CACTACGACT TCCGCCTTGA GATGGACGGC GTGCTGAAGT CCTGGGCCGT GCCCAAAGGC
CCATCGCTCG ATCCCGCCGA CAAGCGCCTC GCCATGGCTG TCGAAGATCA TCCCGTCTCG
TATCTCAAAT TCGAAGGCAT CATCCCCGAG AACAACTACG GCGCAGGCAC CGTGATGGTC
TGGGACATCG GCACCTGGGA GCCGGTTGGC GACGCCGACG CCATGCTCGC CAAGGGCGAT
CTCAAATTCC GGTTGAAGGG CAAAAAGCTC AACGGCGAAT TCGCTCTGGT GCACATCAAG
TCGCGCCGCT CCGGCACCAA GGGTAACGAG TGGCTGCTGA TCAAGCACCG CGATGACGCC
GTCGTCCCTG GCTACGACAT CGACGAGTAC GACTTCTCCG CCCTCACCAA GCGCTCGCTC
GACGACATCG CCGGCGACCA GAAATCGGCC GAGTGGCAAA GCAATCGCGC CGGATCCTCC
AACATCCCGC AGAAAAGCGC GTGGCTCGCG GACGCCATCA AGAAGGCCGA CAAGAAAGCT
GCCGCAAAAA AGACCGCTGT AAAAACAAAG GCTCCAGCAA AAAAGTCCGC CAAAACCGCA
GCCAAGAAAG CTGTGAAGAC CACCGCAACC AAGAAACAGA AAGACGCGCA CCCGGCGTTC
GCCGATCTCA AAGGCGCGCG TCACGCCGCG ATGCCGTCGC AAATCCAGCC CATGCTCGCC
ACGCTCGTAG ATGAGCCCTT TGAAGACTCC CAGTGGCTCT ACGAGATCAA GTGGGACGGC
TATCGCGCCG TCACCTTCCT CAACGATGGC AAACTTCGCT TCGTCTCGCG CAACGGCAAC
GACCTAACTA ACGCCTATCC TGAACTGCAC GACATCGGCG GAAGCATCTC CGCGCAACGC
GCCATTCTCG ACGGCGAAAT CGTCGCCCTC GACGGCGAAG GCCGCTCCTC CTTCAGCCTG
ATGCAACAAC GCACTGGCAT CGGCGAGGGC GGACGCCGCA CCGGCAAGGG CAACGCCAAC
ATTCCCGTGC AGTATTACGC CTTCGACCTG CTCTACCTTG ACGGCTACGA CCTCACGCAC
GTCTCGCTCG AGGACCGCAA ACGGGTGCTC AGCGAAATCA TCTCGCCCAG CGACGTACTG
CGTGTCTCTG ACTCCTTCGA CGAGGGCCTG CCTCTCTACG AAGCCGCCCG CGCGCGCGGG
CTCGAAGGCA TCATCGCCAA GCGTCGCGAG AGTTGCTATC TCACCAAGCG CAGCCGCGAG
TGGCTGAAGA TCAAGATCAC GCAGCGCCAG GAGTGCGTGA TTGGCGGCTA TACCGAGCCC
AAGGGCAGTC GCGAAAATTT CGGCTCCGTC GTCCTCGGCC TCTACGACGA CAAAGGCCGC
CTCATCCCCG TTGGCCAGGC CGGCAGCGGT TTCACCGCCC AGTCAAACGC TGCCCTGTGG
AAGAAACTCC AGAAGCTCGA AACCAAAACT TCACCGTTCT TCGGCAAGCC CGACAGCCCG
CGCCAGGTCC ACTATGTCCG CCCTGAACTC GTTGCCGAAA TCAAGTTCAC CGAGTGGACG
CACCAAGGCC AAAGCGGCCA GGTCAGAATG CGCGCCCCTG TTTTCGAAGG GCTGCGCACT
GACAAATCGC CGAGCGAATG CGTCTTCGAT TTCGCGAAGC CAACAAAATT AGAAGTGAAA
AAAGCCGAAA GCGGCGACGC CGCGTAG
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| Protein sequence | MALEEYKKKR RFTDTPEPPP SIDKSKGHRF VVQKHHASRL HYDFRLEMDG VLKSWAVPKG
PSLDPADKRL AMAVEDHPVS YLKFEGIIPE NNYGAGTVMV WDIGTWEPVG DADAMLAKGD
LKFRLKGKKL NGEFALVHIK SRRSGTKGNE WLLIKHRDDA VVPGYDIDEY DFSALTKRSL
DDIAGDQKSA EWQSNRAGSS NIPQKSAWLA DAIKKADKKA AAKKTAVKTK APAKKSAKTA
AKKAVKTTAT KKQKDAHPAF ADLKGARHAA MPSQIQPMLA TLVDEPFEDS QWLYEIKWDG
YRAVTFLNDG KLRFVSRNGN DLTNAYPELH DIGGSISAQR AILDGEIVAL DGEGRSSFSL
MQQRTGIGEG GRRTGKGNAN IPVQYYAFDL LYLDGYDLTH VSLEDRKRVL SEIISPSDVL
RVSDSFDEGL PLYEAARARG LEGIIAKRRE SCYLTKRSRE WLKIKITQRQ ECVIGGYTEP
KGSRENFGSV VLGLYDDKGR LIPVGQAGSG FTAQSNAALW KKLQKLETKT SPFFGKPDSP
RQVHYVRPEL VAEIKFTEWT HQGQSGQVRM RAPVFEGLRT DKSPSECVFD FAKPTKLEVK
KAESGDAA
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