Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0713 |
Symbol | |
ID | 4069785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 876601 |
End bp | 877350 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982719 |
Product | translation initiation factor 3 |
Protein accession | YP_589792 |
Protein GI | 94967744 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.814826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCTCGA AAACGGCTCT CAACTCTGGA TTTGCAGGTG TTTGGCGCAG ATTTCGGGCG CCACCTGCGT GTTATACTTT TAGAGCAATT CGTGTCCTGG AGGATGGTAT CGATAAGCGT TTTGTCCGCA CCAACGAGCG CATTCGGGCA CGCGAGCTTC GCGTGATCGA TGACGAAGGC AATCAACTCG GCATCTTGCC GCCATTCGAA GCGCTCAAAC TCGCCAAAGA AAAGAACTTG GATTTGGTAG AGGTATCGCC CACCGCACAA CCTCCGGTCT GTCGCATCAT GGACTTTGGA AAGTTCATGT ATGAGACGGA GAAGCGCGAG CGCGCGGCGA AGAAGCACCA GCATGTCATC ACGGTGAAGG AAGTAAAGTT CCGCATCAAC GTGGATGAGC ATGACTACCA GACCAAGAAG AACCATGTAT TGCGGTTCCT CGGCGAGGGC GACAAGGTGA AAGCGACCAT CTTCTTCCGC GGCCGTGAAA TGACGCGGCA GGGGTTAGGA CGCGAGATCC TCGAACGCGT GATCAAGGAC ATTGGCGACA AAGGGATCGT GGAGTTCCGC CCTCGTCAGG AAGGCAATAC GCTGCACCTG ATCCTGGCGC CTCCGAAGTC GCAAGGTGGG CAGAAGCCGA AACCTCTGCA AGCGCAGGCT CCGCAACAGG CGAAGCCACA GCAAGCGAAG CCGCAACAGA GTGCGGCGCC GGCGGAGCCA CAGCCCCAGC CGCAAGAGAA ACAGGGCTGA
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Protein sequence | MFSKTALNSG FAGVWRRFRA PPACYTFRAI RVLEDGIDKR FVRTNERIRA RELRVIDDEG NQLGILPPFE ALKLAKEKNL DLVEVSPTAQ PPVCRIMDFG KFMYETEKRE RAAKKHQHVI TVKEVKFRIN VDEHDYQTKK NHVLRFLGEG DKVKATIFFR GREMTRQGLG REILERVIKD IGDKGIVEFR PRQEGNTLHL ILAPPKSQGG QKPKPLQAQA PQQAKPQQAK PQQSAAPAEP QPQPQEKQG
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