| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0664 |
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| Symbol | |
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| ID | 4069756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 820956 |
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| End bp | 823010 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982670 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_589743 |
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| Protein GI | 94967695 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.250528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA CCTCCATGCA CCGATGCCTT CCGTTGCGGG GAAATCCGCG ACGGAAGGCC
CTTTTCACCG CGCTCTTAAT GGGCGTCTTC GCGGCCGGAG CGAGCGGCCA GACCAAGATC
GAAGGCAAGC AGATTGCCAT AGAATTCGAC GCCCAAATGC ACTCCCGCGC AGTGGCATTC
GGCGAGACGC CATTCGGCGA TTTCAGCAGC TCGGAAAGCG TTGTCGTTGA CGGTAAGACG
CTTTCGGACT TCGCACAGAC TTCACAGCGC ACGGAAGGCG TATCCGACAT GCTTGGTGCA
GGGAAGCGCC TGATCATCGA AGGCAAGTCC GGCGATGTTT TCAAGACCGT GACCGTCAGC
GTCTACGACG ATTTTCCCAA TGCCGCAGTC TTCGACGTCT CCTACAAAAA CGCTGCGTCA
TCTTCGATAG AAATCTCGAA GTGGACGAAC AACGCGTATT CGGTCACTGG CTCATCGTTG
TGGTCGTTCG AACCCGGAAC CTACGAGCGA CGCCCTGCTT GGGTAGCGCC GCTAAAGGTC
GGCTTTCACC AGAAGAACTA TCTCGGGATG AACGCCAGCG ACTACGGTGG CGGAACGCCG
TTCGCCGACA TCTGGTCGCG CAAAGCCGGT CTCGCGATTG GCGACCTCGA ACTGAAGCCT
AAGCAGGTCT CCCTGCCCGT CGCCATGCCC GACGCGAAAC ACGCCACCCT CAGCATCGAA
TTCGTAAACA CACAAAAGCT CGCGCCGGGT GAATCGCTAA CAACCTTCCG AACTTTTGCC
ATTGTTCATC ATGGCGACTA TTTCGCTGCC CTGCTCACTT ACAAGAAACT CATGCAGAAG
CTCGGCCAGC CCGCATCGCA GCGCGCCGCC GATGGTGGTT TCCGGCCGAT GTGGTGCGCC
TGGGGCTATG GACGCCGCTT TACCGTGGCT CAGATAGAGA AGACCATTCC CGAAGCCAAG
CGCATCGGCT TCGAGTGGGT CACTGTTGAC GATGGCTGGC AGACGAAGTA TGGCGATCTG
ACGCTGGATC CGAAGAAGTT TCCTCGGGGC GATGCCGACA TGAAAGCGCT GGTGGATAAA
ATCCACGCCG CCGGCATGAA GGCGCAGTTA TGGTGGTCGC CGATGAGCGC CGCGCCGGAC
TCGGCGTTAC TCAAAGACGA TCCGGACCTC GAGCTGAAGA ACAAGGATGG TTCCCCGCAG
AAAATCTCGT GGTGGAATTC GCTGTATCTG TGTCCTGCGT ACGAGCCAGC GGTTGAGGTT
CAGCGCAAGT TCGTGCAGAA GATCATAGGT GAATGGGGCT TTGATGGTCT CAAGCTCGAC
GGCCAATACA TGAACGCTGT CCCGGCGTGC TATAACCCTG CGCACCATCA CGCAAAGCCG
GAAGATTCCG TCGAGCAACT GCCGTTGCTC TTCAAAGCCA TTTACGACGA AGCGCAGAAG
GAAAAACCTG GCGCGCTGAT TGAGTTCTGT CCTTGCGGCA CGTCGTATTC CTTCTACACC
ATGCCGTACT ACAACATGAG CGTCGCGAGC GATCCTTCGA GTTCCTGGCA GGTGCGTACT
AAAGGGAAGA CGATCAAAGC TCTGCTCGGT GACGGCGTGC CGTACTTCGG CGATCACGTC
GAGCTGAGCG ACAACGCCAG CGACTTCGCC TCGACCGTCG GCGTCGGCGG CGTTGTCGGC
TCGCAATTTA CCTTGCCTGC AGTTGCTTCG CGGCATACCC AATTTGATCT TGTTCCTGCG
CGCCGCAAGA TCTTCGAGAA GTGGGTCGGC CTTTACAAGG AGAAGATGCT GAGCGAAGGC
ACCTACGAGG GCACTCTCTA TGACATCGGC TTTGATCGTC CAGAGGCTCA CGCGATTAAG
AAGGGCAGCG CAATGTACTA CGCGTTCTAC GCTCCGACTT TCAGCGGCAA AGTGGAACTG
CGCGGCCTGG AAGATCGCGA CTACAAAGTG ACCGATTACG AGAACAACAA AGTGTTGGGG
CCGGTCCACG GTCCGACAGC ACAACTGGAA ACAAGTTTTT CGAAACACTT GATGCTGGAA
GCGGACCCGC AATGA
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| Protein sequence | MKLTSMHRCL PLRGNPRRKA LFTALLMGVF AAGASGQTKI EGKQIAIEFD AQMHSRAVAF
GETPFGDFSS SESVVVDGKT LSDFAQTSQR TEGVSDMLGA GKRLIIEGKS GDVFKTVTVS
VYDDFPNAAV FDVSYKNAAS SSIEISKWTN NAYSVTGSSL WSFEPGTYER RPAWVAPLKV
GFHQKNYLGM NASDYGGGTP FADIWSRKAG LAIGDLELKP KQVSLPVAMP DAKHATLSIE
FVNTQKLAPG ESLTTFRTFA IVHHGDYFAA LLTYKKLMQK LGQPASQRAA DGGFRPMWCA
WGYGRRFTVA QIEKTIPEAK RIGFEWVTVD DGWQTKYGDL TLDPKKFPRG DADMKALVDK
IHAAGMKAQL WWSPMSAAPD SALLKDDPDL ELKNKDGSPQ KISWWNSLYL CPAYEPAVEV
QRKFVQKIIG EWGFDGLKLD GQYMNAVPAC YNPAHHHAKP EDSVEQLPLL FKAIYDEAQK
EKPGALIEFC PCGTSYSFYT MPYYNMSVAS DPSSSWQVRT KGKTIKALLG DGVPYFGDHV
ELSDNASDFA STVGVGGVVG SQFTLPAVAS RHTQFDLVPA RRKIFEKWVG LYKEKMLSEG
TYEGTLYDIG FDRPEAHAIK KGSAMYYAFY APTFSGKVEL RGLEDRDYKV TDYENNKVLG
PVHGPTAQLE TSFSKHLMLE ADPQ
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