| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0561 |
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| Symbol | rplM |
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| ID | 4073050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 689686 |
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| End bp | 690114 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982566 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_589640 |
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| Protein GI | 94967592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000224516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.196899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACGT ATTTCCCCAA AGGGGAAGTT GCGCGTAAGT GGTTTGTCGT TGATGCCGAT
GGCCAGACCC TCGGTCGCCT CGCGTCGCGG GTAGCGCGCA TCCTGAGCGG CAAGGACAAC
CCCAAGTACA CGCCGTTTAT TGACACTGGC GACCACGTTG TCGTCATCAA CGCCGAGAAG
ATCAAGATCA CGGGTCTTAA GGCGGACAAC AAGAAGTATT ACCACTACTC CGGCTACCCG
GGCGGCATGA AGGAAGAAGA GTTCCTGAAG CGCCTGGAGC GTCGTCCTGA GTTGATCCTG
GAGACGGCGA TCAAGGGGAT GCTGCCGAAG TCGAAGCTGG GCAAGGCGAT GGGCGGCAAG
CTCAAGGTTT ATCGCGGCGC CGATCATCCG CATATCGCGC AGAAGCCCGA AGTGCTGGCG
AACGCGTAA
|
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| Protein sequence | MSTYFPKGEV ARKWFVVDAD GQTLGRLASR VARILSGKDN PKYTPFIDTG DHVVVINAEK
IKITGLKADN KKYYHYSGYP GGMKEEEFLK RLERRPELIL ETAIKGMLPK SKLGKAMGGK
LKVYRGADHP HIAQKPEVLA NA
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