| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0525 |
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| Symbol | |
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| ID | 4069945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 645947 |
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| End bp | 646615 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982530 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_589604 |
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| Protein GI | 94967556 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.784341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCCCAGC CATTGAAGTC CGGGGAGGCA GCAGACGAGA TCGCGTGTCG CGAGTCGGCG
ATGATCGGCC GGGTCCTGGC GGGCGAGCGT GAACTCTTTC ATGAGTTGAT CCGGCCCTAC
GAAAAGAGCC TGTATTTCTC GGCGTTTTCG CTGTTACGCA ACGCAGAAGA GGCTGAGGAT
GTTGTCCAGG AATCGTTGAT GAAGGCGTAC AGGGCATTGC ATTCGTTTCG CAGCGAGTCG
AAATTCAGCA CTTGGCTCGC GAGCATTGTG CTGAACGAAG CTCGTGGACG CCTGCGGCAC
GAAAGAGTAA TCCCATTTAC ATCGATCGAT GAATCTCCGG ATCCCGACGA AGACTTTACG
CCGGCAGTCA TCGCCGATTG GCGGGAGGTA GCAACCGAGA CGCTGGAGCG CAAAGAAATT
CGCGAGATGA TCCGGCGGGC AATCCGCGAA TTGCCGAACA TCTATCGCGA GGTGTTCGTG
CTACGCGACG TGCAGGAACT GAGCATTGCA GAGTCGGCAA AAGCGTTGGG AATCGCGGAA
GGGCTCGTGA AAGTACGCCT GTTGCGGGCA AGGTTGATGA TGCAAAAGTT CCTTGCACCC
ATGCTGCAGA CGGGCCGTGG TGGACTGTTC GGGTTTCTGA GAAAGGGGGC GGGCGCGTCA
TGGTTCTAA
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| Protein sequence | MSQPLKSGEA ADEIACRESA MIGRVLAGER ELFHELIRPY EKSLYFSAFS LLRNAEEAED
VVQESLMKAY RALHSFRSES KFSTWLASIV LNEARGRLRH ERVIPFTSID ESPDPDEDFT
PAVIADWREV ATETLERKEI REMIRRAIRE LPNIYREVFV LRDVQELSIA ESAKALGIAE
GLVKVRLLRA RLMMQKFLAP MLQTGRGGLF GFLRKGAGAS WF
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