| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0494 |
|---|
| Symbol | |
|---|
| ID | 4068619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 608625 |
|---|
| End bp | 609770 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637982498 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_589573 |
|---|
| Protein GI | 94967525 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family
[TIGR03723] putative glycoprotease GCP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG CCGTCATCCT GGGAATTGAA AGCTCGTGCG ACGAGACCGC CGCGGCTGTG
ATCCGAAACG GCGCAGAAAT CCTCTCCAGC GTAGTGTTCT CGCAGATCTA CACGCATATG
CGGTACGGCG GCGTGGTGCC GGAACTGGCC TCGCGCGAGC ACTTGAAGGC TATCGTTCCC
GTGGTGCGCC AGGCGGTGGA AGACGCTGGA CAGAGCTATG ACAAGATTGA TGCCATCGCT
GTGACACGCG GACCCGGACT GGCCGGAGCG CTGCTGGTGG GCGTGAGTTA TGCGAAGGCG
CTGTCATTCG CGCTGGATAA GCCGCTGATC GGCGTGAACC ACCTGGAAGG ACACATTCAC
GTGGTGCTGC TGGAACAGAA GCAGCAAGGC GTCGGCGAAA TTCAGTTTCC GGTGCTGGCG
CTGGTGGTGA GCGGCGGACA CACGCATCTT TACCTTGCAG AGAAGAAGGA TGCGGGATGG
ACGTATCGCG ATGTGGGACA CACGCGCGAC GATGCGGCCG GCGAGGCCTA CGACAAAGTC
GCGAAGCTGC TGGGGCTTGG ATATCCCGGG GGGCCGATTC TCGATGGCCT GGCAAAGCAT
GGCGATCCCA GGGCGGTGAG GTTTCCGTTC GCGCAGATCA AGCATCGCGA CCGCAATCCG
CAGAACCGAC ATGAGGATGA CGATGCGCGA GTGGATTTCT CGTATAGCGG TATCAAGACC
GCGGTGCTGC GCTATGTTGA AACGCACGAG ATGAAGGCGG CGATTGAAGC GCGGCGAACG
GCGTTGAAGG AAATCGAGAA GCCATCGCAG GACGATTATT TGCGGGTGTG CGATCGGCAG
ACGCTCGATC TGATTGCATC GTTTCAGCGC GCGGTGGTGA ATGATCTTGT CTCGAAGGCG
CTGCACGCGG CTGCGGAAAA CAATGCAGCA ACGCTCTTGG TGACGGGCGG AGTTGCGGCG
AATTCCGAGC TGCGTGAGAC GTTTGAACGA CGTGCCGGCG AACTTGGGTT GCCTGTGTAT
TTCCCTTCGC GACCGCTGTC TACGGACAAC GCGGCGATGA TTGCGGCGGC GGCGTATCCG
CGGTTTCTGA GCGGAGAATT TGCGGCGCCT GATCTGTCCG CGGAAGCCAA TCTTCGCCTG
CGCTAA
|
|---|
| Protein sequence | MADAVILGIE SSCDETAAAV IRNGAEILSS VVFSQIYTHM RYGGVVPELA SREHLKAIVP
VVRQAVEDAG QSYDKIDAIA VTRGPGLAGA LLVGVSYAKA LSFALDKPLI GVNHLEGHIH
VVLLEQKQQG VGEIQFPVLA LVVSGGHTHL YLAEKKDAGW TYRDVGHTRD DAAGEAYDKV
AKLLGLGYPG GPILDGLAKH GDPRAVRFPF AQIKHRDRNP QNRHEDDDAR VDFSYSGIKT
AVLRYVETHE MKAAIEARRT ALKEIEKPSQ DDYLRVCDRQ TLDLIASFQR AVVNDLVSKA
LHAAAENNAA TLLVTGGVAA NSELRETFER RAGELGLPVY FPSRPLSTDN AAMIAAAAYP
RFLSGEFAAP DLSAEANLRL R
|
|---|
| |