| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0389 |
|---|
| Symbol | |
|---|
| ID | 4069211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 446925 |
|---|
| End bp | 447890 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637982392 |
|---|
| Product | dihydroorotate oxidase B, catalytic subunit |
|---|
| Protein accession | YP_589468 |
|---|
| Protein GI | 94967420 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.42122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.593329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA TGGCCACCCA ACCCAAACCC GCCGAGGACG ACGAGCTCCT GTTTGACATG
AGCGTGAGCT TCTGCGGTAT CAAGCTCAAG AACCCCGTGC TCGCCGCCAG CGGGACCTTC
GGCTACGGCG TGGAGTTCGA AGACATCGTC ACCATCGAAA AGCTTGGAGG GTTCGTTTCC
AAGGGCCTCT CCAGAGAACC GATGCCCGGC AATCCTCCGC CTCGACTTTG GGAAACCGCC
GCCGGCATGC TCAACGCCAT CGGCCTCCAG AACATCGGCG CAAAAGCATT CGTCGAAGAA
AAGCTCCCGC TGCTGCGCAA ACTGAAAAAC GTCCCCGTCT TCTGCAACGT CTACGGAACC
TGCAACGAAG ACTACGAAGA GACCATCCGC ATTCTCAACG ACGGCGAAGG CATCACCGCC
TACGAACTCA ACGTCTCCTG CCCCAATACA CAGCACGGCG GCATGACCTT CGGCGCCGAT
CCCACGCTGC TCGCCGAAGT CGTCACCGTC GCCAAAAAAG CCGCCACCCG CCCGCTCATC
GTAAAGCTCT CACCCAACGT CACCAGCATC CCGCAAATGG CGAAAATTGC GCAGGACGCT
GGCGCCGACG CGATCTCCCT GGTCAACACC TTCGTCGGCA TGGCCATCGA CGTCGAAACC
CGCAAACCCC GCATCTCCAA CATCGTCGCC GGCCTCTCCG GCCCCGCAAT CAAGCCGATC
GCCCTCCGCA TGGTCTACGA AGCCGCCAAA ACTGTCACCA TCCCGGTCAT CGGCATCGGC
GGCATCAGCA CCGCCGAAGA CATCGTCGAG TTCATGCTCG CCGGCGCCAC TGCCGTTGAA
GTAGGTACCG CCAACTTCTG GGACCCCTGC GCCAGCGAAC GCCTCGTCGA CCAGCTAGAA
AAATGGTGCC TCGAACACCG AGTCCAAAAA ATCTCCGAAC TCACCGGCGG AATGCTCCTC
TCCTAA
|
|---|
| Protein sequence | MKSMATQPKP AEDDELLFDM SVSFCGIKLK NPVLAASGTF GYGVEFEDIV TIEKLGGFVS
KGLSREPMPG NPPPRLWETA AGMLNAIGLQ NIGAKAFVEE KLPLLRKLKN VPVFCNVYGT
CNEDYEETIR ILNDGEGITA YELNVSCPNT QHGGMTFGAD PTLLAEVVTV AKKAATRPLI
VKLSPNVTSI PQMAKIAQDA GADAISLVNT FVGMAIDVET RKPRISNIVA GLSGPAIKPI
ALRMVYEAAK TVTIPVIGIG GISTAEDIVE FMLAGATAVE VGTANFWDPC ASERLVDQLE
KWCLEHRVQK ISELTGGMLL S
|
|---|
| |