Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0369 |
Symbol | |
ID | 4068996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 410924 |
End bp | 413491 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982372 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_589448 |
Protein GI | 94967400 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.476838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGA ACCTTATTCA GGATGTGCGT TACGCGTTCC GCCAGTTGCG GAAGTCGCCC GGCTTCGCCG CAACCGCGAT CATCACGCTG ACTCTCACCA TCGGCGCCAA TACCGCGATC TATAGCCTCT TCGACCAGGT CCTGCTGCGC AATCTGCCGG TGAAAGATCC GAAGGGTCTT GTCGTCTTCG AGTACAAAGG CTCGCACACT GGTTCCACCA ACAATCACGG CGGCCCGTCG GGCGCTTACT TCTCGTATCC GATGTACAAG GACATTCGCG ATCGCAACAC TGTGTTCGAC GGCGTGATCG CGTCCGATAT TTCGCAAGTC GGCCTGCAGT GGCACAACCA GCCAGAGCTC GTGAACGCCG AACTCGTCAG TGGCAACTAC TTCGATGTTC TCGGTGTTCG TCCGGCCGCC GGCCGCCTGT TTGTGCAGGC CGACGACGTG GTGCCGAATG GAAATCCGCT CGTTGTCCTC AGCTACTCGT ATTGGCAGCG GCGCTTCGGG CTCGATCCCA AAGTAGTCGG CGATAACGTC CTCATCAACG GCCACCCATT CACCGTGATC GGCGTTTCAG CGCCGGGTTT CCAGAGCATG CAGACCGGCT ACCTTCCAGC GATCTATACG CCGATGATGA TGAAGGAACA GGTGACGCCC GGGTGGAACG ACCTCGACAA TCGGCGCTCC ATTTGGCTCA ATATAATTGG CCGTCTGAAG CCCGGGATGA CCATGGCGCA GGCAGAGGCA GGCCTGGATT CGCTCTGGCA TTCGGCGCGC GAAGAAGAAC TGAAAGAGGT TCGCAACAAG AGCGACAAGT TCCGCGAAAA TTTTGGGCCG AAGAGCCACC TCTATCTTCA CAACGGAGCG CGCGGCTTCT CGCTCCTCGA CCAATATCGC ATGCCGATGC TGATTGTGAT GGGCATGGTG TTGCTCGTCG CAGTGATGGC GGCCGTGAAC GTTGCGACGC TGTTGTTGGT TCGCGCGGCG ACTCGCGTGA AAGAGATGTC GGTGCGCTAC GCAATGGGCG CGCGCCGTAC TCGCGTGATT CAACAGCTGC TGAGTGAAGG TTTGATCCTT GGACTCATCG GCGGTGCGCT CGGCATCGTC CTTGCTCCAC AGGCCTCAGC GCTGCTTATT CGCAAAGCCT TTGCAGATTC CAACGGCAAC GTGCCGTTCT CGTCCTCACC CGATATGCGT GTGCTGGCCT TCAATTTTGG GCTGGCGCTA CTGGTGAGCC TGGTATTCAG CATTGCTCCG GCGGTCCAGT TCTGGCGGCC GAACCTCATA CCCGCTCTTA AACAGCAAAC CGTCACCACC GCGGGTGGCG CGTTGCGCTT CCGCAGACTG TCGGTCGCAG TGCAGGTCGG CGTGAGTCTA GTTCTTCTCG TGGGCGCCGG ATTATTCGTA CGCACCTTGG GCAATCTGAA GTCGGCGGAT GTTGGCTTCG TCACCCAACA CTTGATCACG TTCCAGATCG ATCCCCAGCT CGCCGGTTAT GAAGACAATC AAACGGCCGT TCTTCACAAG CGCATCACCG ACTCCCTGAA AGCCCTGCCC GGCGTACAGG CTGTGGCTTC CACCGCGGAC CCGGAACTGG CGAACACGAA TAGCTCGAGC AATTTCAGCA TCGCCGGCAT AACTGAGAAG GAAGGCGATG ACATGAACGC CGAGTGGCCG AATGTCAGCG CCGGGTATTT CTCGGCGATG CAGATTCCGC TGATCACGGG CCGTGACTTT ACCGAATCCG ACGCCGCCGG TTCAGGCAAT GTCGCTGTTA TTAACGAAAC GTTGGCAAAG AAGCATTTCG GATCGCCGGA CAAGGCCATT GGCAAAGTGT TGGCCCGCGG CTCGGGAGAC GACGCCAAGT ACGACATCCA GATCGTCGGC GTAGTGCGCG ATTCGAAGCA CACCAACGTT CGCGACGAAG TGAAACAAGC TCTCTTCACA CCGTTATCGC AGATGCAGCA CTGGGTGCGC GATCCGAAGA AGCCGGGCGC AAAGGAAGTG CTTGTGCCCG ATCAGCCGGG GTTCCTCGCT TACTACGTGC GCACCTGGCA GCCGACCGCA TCGGCGATGA GCCAGATCCG CGGCGCAGTG CAGGGCGTGG ATTCGAAGCT GGTGCTCGAC ACCTTCCGCA CCATGGATGC ACAGATTGAC GACGACGTGA ATACCGAGCG CATCATCGCC CTGCTCGCTT CGGGTTTCGG CATCCTCGCA GCGATCCTTG CGGCGGTCGG ATTGTACGGC GTCCTCGCTT ATTCCACGGC GCAGCGCACC CGCGAGATCG GGGTACGCAT GGCGCTTGGC GCCACCCGCA TGTCCGTGGT CCGCATGGTG CTCACGGAAG TGCTCTGGCT CGCCGGCGCT GGAATTATCG TGGCGCTGCC GGTATCCATC GTGCTCAGTC GGTTCATGCG GGCGCAGTTA TACGGAGTGT CCCATTACGA CCCGCTGACG GTTTTTGCGG TAGTGCTACT GGTGACGCTG GTGGCGGTGG CAGCGGCGAC GTTGCCGGCA CGGCGTGCCG CTGGCATCGA CCCGATGAAG GCATTGCGCT ACGAGTAG
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Protein sequence | MFENLIQDVR YAFRQLRKSP GFAATAIITL TLTIGANTAI YSLFDQVLLR NLPVKDPKGL VVFEYKGSHT GSTNNHGGPS GAYFSYPMYK DIRDRNTVFD GVIASDISQV GLQWHNQPEL VNAELVSGNY FDVLGVRPAA GRLFVQADDV VPNGNPLVVL SYSYWQRRFG LDPKVVGDNV LINGHPFTVI GVSAPGFQSM QTGYLPAIYT PMMMKEQVTP GWNDLDNRRS IWLNIIGRLK PGMTMAQAEA GLDSLWHSAR EEELKEVRNK SDKFRENFGP KSHLYLHNGA RGFSLLDQYR MPMLIVMGMV LLVAVMAAVN VATLLLVRAA TRVKEMSVRY AMGARRTRVI QQLLSEGLIL GLIGGALGIV LAPQASALLI RKAFADSNGN VPFSSSPDMR VLAFNFGLAL LVSLVFSIAP AVQFWRPNLI PALKQQTVTT AGGALRFRRL SVAVQVGVSL VLLVGAGLFV RTLGNLKSAD VGFVTQHLIT FQIDPQLAGY EDNQTAVLHK RITDSLKALP GVQAVASTAD PELANTNSSS NFSIAGITEK EGDDMNAEWP NVSAGYFSAM QIPLITGRDF TESDAAGSGN VAVINETLAK KHFGSPDKAI GKVLARGSGD DAKYDIQIVG VVRDSKHTNV RDEVKQALFT PLSQMQHWVR DPKKPGAKEV LVPDQPGFLA YYVRTWQPTA SAMSQIRGAV QGVDSKLVLD TFRTMDAQID DDVNTERIIA LLASGFGILA AILAAVGLYG VLAYSTAQRT REIGVRMALG ATRMSVVRMV LTEVLWLAGA GIIVALPVSI VLSRFMRAQL YGVSHYDPLT VFAVVLLVTL VAVAAATLPA RRAAGIDPMK ALRYE
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