| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0366 |
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| Symbol | |
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| ID | 4068993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 406360 |
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| End bp | 407673 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982369 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_589445 |
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| Protein GI | 94967397 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.93288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.93988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTAC AGATGGCCCG GAGATGGCGT TCGGCTTGCA CTTCTGTTTT CGTGATGGAT
ATCGCCCGCC CAGAATTCAA ACAGCAAAAG CGCCGCCGCC AGATCATCAT CGGCAGCGTC
GCCGTAGTCA TACTTGTCGC CATTACTCTT GGAGTCTCCC GGCTCAAACC CGCTGCGCCG
TCAGTAGAAC GGAGCACCGT CTGGACTGAC ACGGTGAAGG AAGGCCCCAT GCTGCGCCAG
GTGCGCGGCC TCGGGACGCT CACCCCGACT CCAGAAGATG TCCGGCTGAT TCCCGCCGAA
ACCGACGCCA CCGTGCTGCG GATCGTGAAG CTCTCAGGTT CGCCGGTCAA CTCTGACACG
GTGCTCGTCG AAATGAGCAA TCCCCAGGTT GAACAGGAGG CCGTGGACGC GAATTTGCAG
CTCAAGGCCG CCGAAGCCGA GTACCAGAAC CTGAAGGTGA AGCTCGACGC CGACCTGATG
ACGCAGAAGG CCGGTGCCGC TACCGTCGGA GCTGATTACA GCCAGGCGCA ACGTCAAGCG
TCGACCGACA AGGCCCTCTA CGATCTCGGC GTGATTTCCG GCTTGGCCTA TAAGGCTTCG
CAGGGCAAAG CGGACGAGCT CACCACCCGC AACGATCTCG AAGGCCAGAA GCTCACCATC
AACCAGAAAG CCATTGTTTC GCAGATGGCC GTGCAGCAGG CCAAGGTCGA GCAAATGCGC
GCTCTCGCAC AGCTGAAGCA GCGCCAGCTC GACAAGCTGA AGGTCCGCGC CGGCATCGAT
GGCTTGCTCG TTGATATGCC GTTGCAAGTT GGACAGCGCG TACTGGCGGG CGCAGTACTC
GCAAAGATCG TCCAGCCAAA CCGCCTCATG GCTTCGCTGA AAATTCCCGA AACCCAGGCA
CGTGACGTCC AAATCGGAGA GCCCGCCTCG GTGGATACCC ACAATGGCGT GGTGCAGGGC
AGCGTGATGC GCGTAGATCC GGCGGTGGTG AACGGAACCG TCACGGTTGA CGTAAAACTC
ACTGGCGACC TTCCGAAGGG CGCGCGTCCC GACTTGAGCG TGGATGGAAC TATCGACCTC
GAGCGTCTCG ACAAAACTGT ATACGTCGGG CGTCCGGCAT TCGGGCAGGA GAACAGCACC
ATCAGCCTCT TCCGCCTCGA TCCGGATGGC AAGGGCGCAA GCCGGGTTCC GGTGAAAGTG
GGCCGCACCT CGGTGAACAC CATCCAGGTA ATCGAAGGAC TAAAGCCGGG CGACACGGTG
ATTCTCTCGG ATATGTCGCG TTGGGATTCA AACGACAGGA TTCGGTTGGA CTAA
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| Protein sequence | MSLQMARRWR SACTSVFVMD IARPEFKQQK RRRQIIIGSV AVVILVAITL GVSRLKPAAP
SVERSTVWTD TVKEGPMLRQ VRGLGTLTPT PEDVRLIPAE TDATVLRIVK LSGSPVNSDT
VLVEMSNPQV EQEAVDANLQ LKAAEAEYQN LKVKLDADLM TQKAGAATVG ADYSQAQRQA
STDKALYDLG VISGLAYKAS QGKADELTTR NDLEGQKLTI NQKAIVSQMA VQQAKVEQMR
ALAQLKQRQL DKLKVRAGID GLLVDMPLQV GQRVLAGAVL AKIVQPNRLM ASLKIPETQA
RDVQIGEPAS VDTHNGVVQG SVMRVDPAVV NGTVTVDVKL TGDLPKGARP DLSVDGTIDL
ERLDKTVYVG RPAFGQENST ISLFRLDPDG KGASRVPVKV GRTSVNTIQV IEGLKPGDTV
ILSDMSRWDS NDRIRLD
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