Gene Acid345_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0245 
Symbol 
ID4073095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp258339 
End bp259106 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID637982246 
ProductTonB-like protein 
Protein accessionYP_589324 
Protein GI94967276 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.854856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGTGG AAGAGAAGGA GCACACCATG TTTGAGCAGA GCCTGGTCGA AATCTCCGCG 
GAGACGAAAC GCCGGAAGCG CTGGACGCAA CTGATTTCGT ATTCGCTCGA AGCCACCGCA
GTCGTCGTAT TGCTCGCGTT TCCGCTGGTG CATACGGAAG CGTTGCCACT GGACGACAGT
CCCAAGATCT TCCCGCCGAT TTATCACGCG CCGCCGCATG TGGATGTGAT CACGGAGCAC
GCGCCTGCAC CGCGCCCGGT TCGCGACAAT CACGTAATGA TCAATCCATA CTTGGCGCCA
ACCAGCGTCG GAAAGACGAT TGATCGCAGT CACGATGCCG ACAAGTATTC CGCCGCCGAA
GAGCTTGTAT GCGTCGGTTG CATTCCAGAT CCAACCGGTA CCGATAGCAG CCGTCATAAC
CCCGTTCTCG AAAGTGTGCT GCGTCCTGGC CCGGTGCAAC CGACGCATCG CGCAGCGCCG
GTGACTCGCA CTTCGAAATC GCAGGAGAGC CTGCTGCTCC GCCAGGTAAA ACCCACTTAC
CCACGCATGG CGGTCATGAC GCGGACGCAG GGAGTCGTGC AACTGCACGC GATCATCGGC
CGCGACGGCT CGATCCAGCA GTTGCAGGTT GTGAGCGGAT CTCCGTTCTT AGTCCAGGCA
GCGCTCGAGG CGGTGCAGCA GTGGAAGTAT CGGCCGTATC TGCTCAACGG TGAGCCTGTG
GAGGTGGAAA CGCAGATCAC CGTGAATTTC ACGCTAAATG GGAATTAA
 
Protein sequence
MRVEEKEHTM FEQSLVEISA ETKRRKRWTQ LISYSLEATA VVVLLAFPLV HTEALPLDDS 
PKIFPPIYHA PPHVDVITEH APAPRPVRDN HVMINPYLAP TSVGKTIDRS HDADKYSAAE
ELVCVGCIPD PTGTDSSRHN PVLESVLRPG PVQPTHRAAP VTRTSKSQES LLLRQVKPTY
PRMAVMTRTQ GVVQLHAIIG RDGSIQQLQV VSGSPFLVQA ALEAVQQWKY RPYLLNGEPV
EVETQITVNF TLNGN