| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0152 |
|---|
| Symbol | |
|---|
| ID | 4069737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 160542 |
|---|
| End bp | 161363 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637982152 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_589231 |
|---|
| Protein GI | 94967183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.072863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00176598 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGAA GCGCACGGGT ATTGGTCGTA GTCGCAGCCC TGCTAGCCAT GCTCGCGGGC
ACAGGTTGCA ACAAGCTGAA AGCGCGCGAC CAACTCAATA AGGGCGTCCA GTCGTACAAG
AACGCCAAGT ATGAAGAGGC GATCGAGCAT TTCAAGAACG CTGTCGAGCT TGACAACTCG
CTGACCAACG CACGACTTTA CCTCGCGACG GCATATGCCC AGCAGTATGT TCCGGGTATG
GATGCTCCTG AGAACGTCCG CAATGCCAAT ATGGCGATCG AGGAATTCAC CAAGATTCTC
GATGCGAATC CGAGCCGCGA GCAGCAGATC CACAGCCTGA AAGGCATTGC TTCGCTCTAC
TTCAACATGA AGAAGTTCGA CCAGGCTTCG GAGTATCACA AGAAGGTTAT CGCGCTCGAT
CCGAACGATC CGGAGACCTA CTACTCCATC GCGGTGATCG ATTGGACGGA AGCGTACCAG
GAAGATCAGA AGGCCCGGGC TGCCGCCGGC GTACAAGCCA CGGCTCAGCT GAAGGACAAA
AAGGTCTGCC AGGAACTTCG CACGAAGAAT GCCCAGAAGG TTGAAGACGG CATTAACGCC
CTTACGAAGG CCATCCAGCT TCGTCCGGAT TACGATGATG CCATGGCTTA CATCAACCTG
CTCTACCGTC AGCGCGCCGA GTACGAATGT GACGACCAGG CCGCTTACGA TGCCGATATC
AAGACGGCGA ACGAGTGGGT AGACAAGACG ATCGCGACCA AGAAGGCGAA GGCTGAAAAG
GCCGGGCCGA CGGGCGTGAT CACCACCGAT CAATCGAAGT AA
|
|---|
| Protein sequence | MTRSARVLVV VAALLAMLAG TGCNKLKARD QLNKGVQSYK NAKYEEAIEH FKNAVELDNS
LTNARLYLAT AYAQQYVPGM DAPENVRNAN MAIEEFTKIL DANPSREQQI HSLKGIASLY
FNMKKFDQAS EYHKKVIALD PNDPETYYSI AVIDWTEAYQ EDQKARAAAG VQATAQLKDK
KVCQELRTKN AQKVEDGINA LTKAIQLRPD YDDAMAYINL LYRQRAEYEC DDQAAYDADI
KTANEWVDKT IATKKAKAEK AGPTGVITTD QSK
|
|---|
| |