Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0050 |
Symbol | |
ID | 4069984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 48026 |
End bp | 48958 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982050 |
Product | polysaccharide deacetylase |
Protein accession | YP_589129 |
Protein GI | 94967081 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGTC GAGAGTTTCT TGGGAGCTTG GTGGCGGCAG TGGCGTGCGC AGCAGCGGGA GATGCGTTTG CTGAAGAGCG TGCGCGGCAG ATTGCGTTTA CGTTTGACGA TCCGAAAACT GACAGCGGCC CCGGGCTGAC CTGGCAGCAG GTGAATGACA ACCTGCTCGC CGCGCTGGAT AAGGCCAACG TGAAGGCGGC TTTGTTCGTG ACCGGGATGC GCGTGGACAG CGAGGATGGG CGCAAGCTGG TGGCGAAGTG GAACGATGCG GGGCATTTGA TCGGGAGCCA CTCGTATTCG CACTTGTTCT TCGATTCGAA GAAGGTGACG CTGGCGGGGT TTGAGGCGGA TCTGTTGAAG AACGAGCCGC TGGTGGAGAG GTACTCGCAG TTTCAGAAGC TGTTTCGGTT TCCGTTTTTT AAAGAGGGGA ACACGAAAGA GAAGCGCGAC GGGATGCGCG CGTTTTTGAA GGAGCATGGA TACAGGATTG GGCGGGCGAC CGTGGATGCT TCGGATTGGG CGATTGATGG GCGCATGCGC AAGCGGTATG AGAAAGATGC GAAGGCCGAC CTGCGGCCGT ATCGCGACTT CTATCTGCAA CACATCTGGG ACCGCGCGCA GTATTACGAT TCGCTGGCAC AGCGCGTGTT AGGACGGAGT CCCGCGCACA CGGTATTGCT CCATCATTCG CCGATGAATG CGATGTTCTT GCCGGATTTG ATTGCTCAAT TCAAGGGCAA GGGATGGGAG CCGGTGGATG CGGCGAAGGC GTTTGCCGAT CCGGTGTACG ACCGGCAGCC GGACATTTTG CCTTGCGGCG AGAGCTTGAT CTGGGCGCTG GCGAAAGAGA CGGGGAAGTT CGACGCGGAG CTGCGGTATC CGGGCGAGGA CGACGTGTAC GAGAACCCAA AGATGGATGC GCTCGGTTTG TGA
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Protein sequence | MRRREFLGSL VAAVACAAAG DAFAEERARQ IAFTFDDPKT DSGPGLTWQQ VNDNLLAALD KANVKAALFV TGMRVDSEDG RKLVAKWNDA GHLIGSHSYS HLFFDSKKVT LAGFEADLLK NEPLVERYSQ FQKLFRFPFF KEGNTKEKRD GMRAFLKEHG YRIGRATVDA SDWAIDGRMR KRYEKDAKAD LRPYRDFYLQ HIWDRAQYYD SLAQRVLGRS PAHTVLLHHS PMNAMFLPDL IAQFKGKGWE PVDAAKAFAD PVYDRQPDIL PCGESLIWAL AKETGKFDAE LRYPGEDDVY ENPKMDALGL
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