Gene Acid345_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0008 
Symbol 
ID4070018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp8277 
End bp10916 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content57% 
IMG OID637982008 
ProductDNA gyrase subunit B 
Protein accessionYP_589087 
Protein GI94967039 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.938168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA AGGAAACGGC AGCAGCGGCG GCAGCCGAGA AGAAACTGAA CGGCGCCACG 
GAACCGAAGA AGAACGGCAA CGGAAACGGC TCGTCGGACT ATAACGAGGA TTCGATTAAG
GTGCTCGGCG GCATGGAAGC CGTCCGCAAG CGCCCTGCGA TGTACATCGG ATCGACCGGC
GAGATGGGCT TGCATCATCT CGTTTACGAA GTGGTTGACA ATTCGGTAGA TGAAGCGCTG
GCGGGTCACG CCGACCGAAT CGACGTCACC ATCCATATCG ACAACTCGAT CACCGTTATC
GACAACGGCC GCGGCATTCC CACCGGCGAC ATGGACATTG ACGGCGAGAT GATTCCGGCG
GCACAGGTTG TGATGACCGT GCTCCACGCC GGCGGAAAGT TCGATAGCTC GAACTACAAA
GTGTCGGGTG GCCTGCACGG TGTCGGTGTG AGCTGCGTGA ACGCACTGAG CTCGCTGTTG
GAACTCGAGA TCTGGCGCGA TGGACACGTG TGGCAGCAGG AATATTCCGA AGGCGTTCCG
ACTACCAAGT TGAAGAAGTC CGGCAAGACC ACGAAGCTCG GAACCAAGAT CCACTTCATT
CCGGATGCAA AGATCTTCAC TGTCTCCGAG TACAACTACG ACACGCTGGC GAATCGTCTG
CGCGAATTGG CGTTCCTCAA CAAGGGACTG CTGATCACGC TCACCGATGA GCGCACCACG
GACCCGAAGA CGGGCGAGTC GAAGCACCAG GAGTTCAAGT ACACGGGCGG TATCGCGGAG
TTCATCAAGC ACCTGAACCG CGGCAAGAGC GTGTTGCACG AAAAGCCGAT CTACATGGAA
GCTGAACGCG ATGGCGTGGC GATGGAAATT GCGCTGCAGT ACAACGACGC GTATTCCGAA
ACTGTTTTCA GCTTCGCTAA CAACATCAAC ACCGTCGACG GAGGTACCCA CCTCCAGGGC
TTCCGTTCCT CACTTACGCG AACCATCAAC TACGCCGGCC AGCAGCTTGG TTTGTTCAAA
GATGTGAAAG AGAACCTGAG TGGCGACGAC GTGCGCGAAG GCCTCGTCGC TGTCATCAGC
GTAAAGCTGT CGCAGCCGCA GTTCGAAGGC CAGACGAAGG GTAAGCTGAA TTCGGATATC
GCTGGTATCG TGCAGGCGTT TGTGAATGAG CGCCTGGGCG CGTTTTTCGA GCAGAACCCG
CCGGTGGCTC GCAAGATCAT CAACAAGGCG ATTGAAGCTT CCCGCGCACG CGAGGCCGCT
CGCAAAGCTC GTGATCTTAC GCGTCGTAAA GGTGCGTTGG ATGGTGGCGG TTTGCCGGGC
AAACTGGCGG ACTGTTCCGA ACGCCAGCCG GAGCGCTGTG AAGTGTATCT CGTCGAGGGT
GAAAGCGCAG GCGGCACCGC GAAGCAGGGC CGCGATCGTC GCTTCCAGGC GATCCTCCCG
CTGAAGGGAA AGATTCTCAA CGTGGAGAAG GCACGCTACG ACAAGATGCT CGGGCACGAA
GAAATCCGGG CGATGATCAC CGCGCTCGGC ACGGGCATCG GCAAGGATGA CTTCGATTAC
GCGAAACTGC GTTACGGCAA GATCATCCTG ATGACGGACG CCGACGTGGA CGGTTCGCAC
ATTCGTACGC TGCTGCTCAC GTTTTTCTTC CGCCACATGC AGGAGCTCAT CAAGCGCGGC
AACGTGTTTA TCGCGCAGCC GCCGTTGTAT CGCATCAAGA AAGGCAAGTT CGAACAGTAC
ATCAAGAACG AAGCCGAGTT CGTGAAGGTG ATGGTGAAGC GCGCGGCGGA CGGCATGGTG
ATCCGCTACG GCGAGGGCGC TGCGAAGTTG GAAGGCGCGC AGCTCACACG CTTCATGACC
TCGCTGAATG AGTACATCGG GTTCTTCGAG AAAGTATCGA AGCGGGTTCG CGACGAACGC
GTCGTCGAAT TGATGGAAAA GCTTGAACTC TCCAAGAAAG TTGACTTTGA GGGCGAAGCC
AAGAAGTCTC CGGCCAAGGT CGCTGCGCTT GAGAAAGAGA TCAAGGCCAT CGCGAAAGAC
CGGAAGCTCC GCGACATCGA AGCAAGGTTC GATGACGAGC ACAATCTCTG GTTCGTGCGC
TTCGTGAACG ACCAGGGTGC TGAGCATTTG CTGAACTGGG AGCTTGCGAC CAGCCCCGAG
TACCGGCAGA TGATGTCGAA GTACGCACAG ATCAAAGACT TCATGGAGCC GCCGTTTGTG
ATCGAGACGG CTTCGAAGAA GAGCTCAAGC GCTGCGGAGG CTGCGGAAGA TCTGAGTGAC
GCCGAGCGCG CCGATCTCGA AAAGGCCGAA CAGAAGAGCG CCAAGGTTGC AGTCCGTCGC
ACCAGGGCAG GTGAGCCGGA AATCGTGGAA AAGACAAACG TCCGCGAGCT CTTCGATTAC
GTGCTGAGCG AGGGCAAGAA AGAGTACTCG GTACAGCGCT ACAAAGGTCT TGGCGAAATG
ACCGCCGAAC AGTTGTGGAT GACCACCATG GATCCCGAGA GGCGCACTCT GCTGGAAGTG
AAGCTCGAGG ACATGACGGA GACCGAAACC ATCTTCAGCA CGCTGATGGG CGAAGACGTG
GAAGCACGCC GAAAGTTCAT CGAAGAGAAC GCGCTGGATG TGAAGAACCT GGACATCTAA
 
Protein sequence
MASKETAAAA AAEKKLNGAT EPKKNGNGNG SSDYNEDSIK VLGGMEAVRK RPAMYIGSTG 
EMGLHHLVYE VVDNSVDEAL AGHADRIDVT IHIDNSITVI DNGRGIPTGD MDIDGEMIPA
AQVVMTVLHA GGKFDSSNYK VSGGLHGVGV SCVNALSSLL ELEIWRDGHV WQQEYSEGVP
TTKLKKSGKT TKLGTKIHFI PDAKIFTVSE YNYDTLANRL RELAFLNKGL LITLTDERTT
DPKTGESKHQ EFKYTGGIAE FIKHLNRGKS VLHEKPIYME AERDGVAMEI ALQYNDAYSE
TVFSFANNIN TVDGGTHLQG FRSSLTRTIN YAGQQLGLFK DVKENLSGDD VREGLVAVIS
VKLSQPQFEG QTKGKLNSDI AGIVQAFVNE RLGAFFEQNP PVARKIINKA IEASRAREAA
RKARDLTRRK GALDGGGLPG KLADCSERQP ERCEVYLVEG ESAGGTAKQG RDRRFQAILP
LKGKILNVEK ARYDKMLGHE EIRAMITALG TGIGKDDFDY AKLRYGKIIL MTDADVDGSH
IRTLLLTFFF RHMQELIKRG NVFIAQPPLY RIKKGKFEQY IKNEAEFVKV MVKRAADGMV
IRYGEGAAKL EGAQLTRFMT SLNEYIGFFE KVSKRVRDER VVELMEKLEL SKKVDFEGEA
KKSPAKVAAL EKEIKAIAKD RKLRDIEARF DDEHNLWFVR FVNDQGAEHL LNWELATSPE
YRQMMSKYAQ IKDFMEPPFV IETASKKSSS AAEAAEDLSD AERADLEKAE QKSAKVAVRR
TRAGEPEIVE KTNVRELFDY VLSEGKKEYS VQRYKGLGEM TAEQLWMTTM DPERRTLLEV
KLEDMTETET IFSTLMGEDV EARRKFIEEN ALDVKNLDI