Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0008 |
Symbol | |
ID | 4070018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 8277 |
End bp | 10916 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982008 |
Product | DNA gyrase subunit B |
Protein accession | YP_589087 |
Protein GI | 94967039 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.938168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.282222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCGA AGGAAACGGC AGCAGCGGCG GCAGCCGAGA AGAAACTGAA CGGCGCCACG GAACCGAAGA AGAACGGCAA CGGAAACGGC TCGTCGGACT ATAACGAGGA TTCGATTAAG GTGCTCGGCG GCATGGAAGC CGTCCGCAAG CGCCCTGCGA TGTACATCGG ATCGACCGGC GAGATGGGCT TGCATCATCT CGTTTACGAA GTGGTTGACA ATTCGGTAGA TGAAGCGCTG GCGGGTCACG CCGACCGAAT CGACGTCACC ATCCATATCG ACAACTCGAT CACCGTTATC GACAACGGCC GCGGCATTCC CACCGGCGAC ATGGACATTG ACGGCGAGAT GATTCCGGCG GCACAGGTTG TGATGACCGT GCTCCACGCC GGCGGAAAGT TCGATAGCTC GAACTACAAA GTGTCGGGTG GCCTGCACGG TGTCGGTGTG AGCTGCGTGA ACGCACTGAG CTCGCTGTTG GAACTCGAGA TCTGGCGCGA TGGACACGTG TGGCAGCAGG AATATTCCGA AGGCGTTCCG ACTACCAAGT TGAAGAAGTC CGGCAAGACC ACGAAGCTCG GAACCAAGAT CCACTTCATT CCGGATGCAA AGATCTTCAC TGTCTCCGAG TACAACTACG ACACGCTGGC GAATCGTCTG CGCGAATTGG CGTTCCTCAA CAAGGGACTG CTGATCACGC TCACCGATGA GCGCACCACG GACCCGAAGA CGGGCGAGTC GAAGCACCAG GAGTTCAAGT ACACGGGCGG TATCGCGGAG TTCATCAAGC ACCTGAACCG CGGCAAGAGC GTGTTGCACG AAAAGCCGAT CTACATGGAA GCTGAACGCG ATGGCGTGGC GATGGAAATT GCGCTGCAGT ACAACGACGC GTATTCCGAA ACTGTTTTCA GCTTCGCTAA CAACATCAAC ACCGTCGACG GAGGTACCCA CCTCCAGGGC TTCCGTTCCT CACTTACGCG AACCATCAAC TACGCCGGCC AGCAGCTTGG TTTGTTCAAA GATGTGAAAG AGAACCTGAG TGGCGACGAC GTGCGCGAAG GCCTCGTCGC TGTCATCAGC GTAAAGCTGT CGCAGCCGCA GTTCGAAGGC CAGACGAAGG GTAAGCTGAA TTCGGATATC GCTGGTATCG TGCAGGCGTT TGTGAATGAG CGCCTGGGCG CGTTTTTCGA GCAGAACCCG CCGGTGGCTC GCAAGATCAT CAACAAGGCG ATTGAAGCTT CCCGCGCACG CGAGGCCGCT CGCAAAGCTC GTGATCTTAC GCGTCGTAAA GGTGCGTTGG ATGGTGGCGG TTTGCCGGGC AAACTGGCGG ACTGTTCCGA ACGCCAGCCG GAGCGCTGTG AAGTGTATCT CGTCGAGGGT GAAAGCGCAG GCGGCACCGC GAAGCAGGGC CGCGATCGTC GCTTCCAGGC GATCCTCCCG CTGAAGGGAA AGATTCTCAA CGTGGAGAAG GCACGCTACG ACAAGATGCT CGGGCACGAA GAAATCCGGG CGATGATCAC CGCGCTCGGC ACGGGCATCG GCAAGGATGA CTTCGATTAC GCGAAACTGC GTTACGGCAA GATCATCCTG ATGACGGACG CCGACGTGGA CGGTTCGCAC ATTCGTACGC TGCTGCTCAC GTTTTTCTTC CGCCACATGC AGGAGCTCAT CAAGCGCGGC AACGTGTTTA TCGCGCAGCC GCCGTTGTAT CGCATCAAGA AAGGCAAGTT CGAACAGTAC ATCAAGAACG AAGCCGAGTT CGTGAAGGTG ATGGTGAAGC GCGCGGCGGA CGGCATGGTG ATCCGCTACG GCGAGGGCGC TGCGAAGTTG GAAGGCGCGC AGCTCACACG CTTCATGACC TCGCTGAATG AGTACATCGG GTTCTTCGAG AAAGTATCGA AGCGGGTTCG CGACGAACGC GTCGTCGAAT TGATGGAAAA GCTTGAACTC TCCAAGAAAG TTGACTTTGA GGGCGAAGCC AAGAAGTCTC CGGCCAAGGT CGCTGCGCTT GAGAAAGAGA TCAAGGCCAT CGCGAAAGAC CGGAAGCTCC GCGACATCGA AGCAAGGTTC GATGACGAGC ACAATCTCTG GTTCGTGCGC TTCGTGAACG ACCAGGGTGC TGAGCATTTG CTGAACTGGG AGCTTGCGAC CAGCCCCGAG TACCGGCAGA TGATGTCGAA GTACGCACAG ATCAAAGACT TCATGGAGCC GCCGTTTGTG ATCGAGACGG CTTCGAAGAA GAGCTCAAGC GCTGCGGAGG CTGCGGAAGA TCTGAGTGAC GCCGAGCGCG CCGATCTCGA AAAGGCCGAA CAGAAGAGCG CCAAGGTTGC AGTCCGTCGC ACCAGGGCAG GTGAGCCGGA AATCGTGGAA AAGACAAACG TCCGCGAGCT CTTCGATTAC GTGCTGAGCG AGGGCAAGAA AGAGTACTCG GTACAGCGCT ACAAAGGTCT TGGCGAAATG ACCGCCGAAC AGTTGTGGAT GACCACCATG GATCCCGAGA GGCGCACTCT GCTGGAAGTG AAGCTCGAGG ACATGACGGA GACCGAAACC ATCTTCAGCA CGCTGATGGG CGAAGACGTG GAAGCACGCC GAAAGTTCAT CGAAGAGAAC GCGCTGGATG TGAAGAACCT GGACATCTAA
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Protein sequence | MASKETAAAA AAEKKLNGAT EPKKNGNGNG SSDYNEDSIK VLGGMEAVRK RPAMYIGSTG EMGLHHLVYE VVDNSVDEAL AGHADRIDVT IHIDNSITVI DNGRGIPTGD MDIDGEMIPA AQVVMTVLHA GGKFDSSNYK VSGGLHGVGV SCVNALSSLL ELEIWRDGHV WQQEYSEGVP TTKLKKSGKT TKLGTKIHFI PDAKIFTVSE YNYDTLANRL RELAFLNKGL LITLTDERTT DPKTGESKHQ EFKYTGGIAE FIKHLNRGKS VLHEKPIYME AERDGVAMEI ALQYNDAYSE TVFSFANNIN TVDGGTHLQG FRSSLTRTIN YAGQQLGLFK DVKENLSGDD VREGLVAVIS VKLSQPQFEG QTKGKLNSDI AGIVQAFVNE RLGAFFEQNP PVARKIINKA IEASRAREAA RKARDLTRRK GALDGGGLPG KLADCSERQP ERCEVYLVEG ESAGGTAKQG RDRRFQAILP LKGKILNVEK ARYDKMLGHE EIRAMITALG TGIGKDDFDY AKLRYGKIIL MTDADVDGSH IRTLLLTFFF RHMQELIKRG NVFIAQPPLY RIKKGKFEQY IKNEAEFVKV MVKRAADGMV IRYGEGAAKL EGAQLTRFMT SLNEYIGFFE KVSKRVRDER VVELMEKLEL SKKVDFEGEA KKSPAKVAAL EKEIKAIAKD RKLRDIEARF DDEHNLWFVR FVNDQGAEHL LNWELATSPE YRQMMSKYAQ IKDFMEPPFV IETASKKSSS AAEAAEDLSD AERADLEKAE QKSAKVAVRR TRAGEPEIVE KTNVRELFDY VLSEGKKEYS VQRYKGLGEM TAEQLWMTTM DPERRTLLEV KLEDMTETET IFSTLMGEDV EARRKFIEEN ALDVKNLDI
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