Gene Acel_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2146 
Symbol 
ID4485614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2429532 
End bp2430143 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID639730948 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_873904 
Protein GI117929353 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCG AGCCTACCGA GATGACGCAG GTCGATGATG CGACCTTGCT ACGGCGTCAC 
CTCGCCGGTG ATCGGGATGC CTTTGCGCAG ATCTTCCACC GGCACCGGGA TCGGCTCTGG
TCGGTCGCGC TGCGGACGCT CGGAAATCCG GCGGACGCCG CGGACGCCGT CCAGGACGCG
ATGCTCTCCG CGGTGCGGTC TGCGCCGTCC TTTCGCGGCG ACGCGCAGGT CGGCACCTGG
CTCTACCGGA TCGTCGTCAA CGCCTGCGTG AGCCGGCTCC GCCGTCCGGC CGCGCTGCCG
CTCGACGAGG CACTCGGCAC AGATTCGCCG GACCCTGCCG AGCGCGCAGC AGTCGCGGTC
GATGTGCAGG ACGCACTTGC GGCGCTCCCC GCCGAGCAAC GGCTCGCCGT CGTCTTGGTG
GATGTCGAGG GCCTTCCGGT TGCCGACGTT GCGGAGCTGC TCGGCGTACC CGTCGGCACG
ATCAAGAGCC GCTGTTTTCG AGCCCGGGCC GCATTGGCTG TCGCGCTTGG ACACCTGCGC
GCAGGGAACC GGACAACCGG TGAAGACGTC CAACCGCCGA CGGCGACTGA AGCGGAGGGG
GATGTCACGT GA
 
Protein sequence
MAGEPTEMTQ VDDATLLRRH LAGDRDAFAQ IFHRHRDRLW SVALRTLGNP ADAADAVQDA 
MLSAVRSAPS FRGDAQVGTW LYRIVVNACV SRLRRPAALP LDEALGTDSP DPAERAAVAV
DVQDALAALP AEQRLAVVLV DVEGLPVADV AELLGVPVGT IKSRCFRARA ALAVALGHLR
AGNRTTGEDV QPPTATEAEG DVT