Gene Acel_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2088 
Symbol 
ID4485677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2363186 
End bp2364022 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID639730888 
ProductABC-3 protein 
Protein accessionYP_873846 
Protein GI117929295 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCT ATCCCTTCAT GATTCATGCC CTCGCGGCGG GCAGTATCGT TGCGGTCATC 
GCCGCCGTGG TCGGTTGGTT CATGGTGTTA CGCCGACAGA GCTTCGCGGG TCACGCCATC
TCGCTCGCCG CCTTTCCCGG AGCCGCAGGC GCGGCGGCAT TGGGCTGGAA CGTCACGGCC
GGATATTTCG TCAGCTGTTT TCTCGTCGCC GGGATCCTTA GCGCTCTCGG ACCGCGAAGC
CAGCCTGGGA CGCCGCGGGA ATCCGCGATA GTCGGAACAG TTCTCGCGTT CATCCTCAGC
TGCGGTTATC TCTTTTCCGC GCTCTCCGGA ACATTGTTGT CCGAGACCAC CCACACGTTG
TTCGGCTTCA TCTTCGGTAT TTCCCAGGCT GAGCTGGTGG CGCTCGCGGC CACTGCTGCC
GCGCTGCTCG TCGTCCTCGG TGTCGTCGGA CGTCCGCTAC TCTTCGCCTC CGTCGACGCG
ACATTGGCGC AGGCCCGCGG ATTGCCGCTG CGCCTTCTCG ACCTCGCATT CCTTTCTGCG
CTGGCCGTTG CCTCGGCTGA AGGAAGCCAG ATCACCGGCG CGCTGCTCGT CTTTCCACTG
CTCGTGCTGC CGGCGGCGAT CGCCCGGGAC ATCACCAGCA GGCCGGCCGT CAGTCTGCTG
CTCAGCATTG GTTTCGGACT GGCCGCGGTC TGGATTGGAT TGGTCATTGC CTACGCCACC
TCGTACCCGA GCGGTTTCTG CGTGACGACA CCGGTTTTCG CGGGCTTTGT CGTCACGAGA
CTTCTCCGCC GCCACGAACG CGGGCGCATC GCACGACAGG TGGTGACCTC GCCGTGA
 
Protein sequence
MLRYPFMIHA LAAGSIVAVI AAVVGWFMVL RRQSFAGHAI SLAAFPGAAG AAALGWNVTA 
GYFVSCFLVA GILSALGPRS QPGTPRESAI VGTVLAFILS CGYLFSALSG TLLSETTHTL
FGFIFGISQA ELVALAATAA ALLVVLGVVG RPLLFASVDA TLAQARGLPL RLLDLAFLSA
LAVASAEGSQ ITGALLVFPL LVLPAAIARD ITSRPAVSLL LSIGFGLAAV WIGLVIAYAT
SYPSGFCVTT PVFAGFVVTR LLRRHERGRI ARQVVTSP