| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_2056 |
|---|
| Symbol | |
|---|
| ID | 4484735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2331234 |
|---|
| End bp | 2332817 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639730852 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_873814 |
|---|
| Protein GI | 117929263 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTC CGTTCAACGG CACCGAGTTT GCCCTCGTCG TTGTTCTCTT TGTGTTCGTC
GCGGTACTCG GTTTTCTCGC GGCGCGTTGG CAGCGTGGCG AAACGCTTGC GCATATCGAT
GAATGGGGCT TGGGCGGCCG CCGTTTCGGC ACGTGGGTCA CGTGGTTCCT CGTCGGCGGT
GACCTCTACA CCGCGTACAC GTTCGTGGCC GTTCCCGCCC TGGTCTTCGG ATCTGGCGCG
CTTGGATTTT TTGCCGTGCC GTATACCATT GTGGTCTATC CGATCGTCAT GTTCGCAGCC
GCCCGCATGT GGTCGGTGGC CCGGCGGCAT GGTTTTGTTA CCGCTGCAGA TTTCGTCCGG
GGCCGGCACG GTTCCCACGC GCTCGCCGTC GCGACCGCGC TCACCGGCAT CGTGGCAACC
ATGCCATACA TCGCCTTGCA GCTGGCCGGC ATCAGAGCGG TGATCGAGGC GGCAGGCATC
AACGGCGATT GGCCGTTATG GATTGCGTTC GCCGTGCTCG CTGCGTACAC GTATTCGTCA
GGATTGCGTG CACCGGCGCT GATTGCATTC GTGAAAGACA TCCTGATTTA CGCCGCGGTG
CTCGCGGCCG TCATCTGGAT TCCGTACAAA CTCCACGGGT ACGACCACAT CTTCTCGGCG
GCGAATGCGC ATTTCGCGGC GGCCAAATCC GGCGGCATTA CGCTCAAGGA CACGCAGTAT
CTCGCATACT CCACGCTGGC CTTCGGTTCG GCGCTGGCCC TGTTCCTCTA TCCGCACTCG
GTCACCGGCG TGCTCGCTGC GAAGAGCCGA GACACGGTCA AGAAGAACAT GTCGCTGCTT
CCGGCGTACA GTCTGATGCT CGGCTTCCTT GCGCTGCTCG GCTACATGGC GATCGCGGCT
GGTGTCAAAC CGGCGCTTGG CGCCGGTGGC AAGGCGGATA CGAACACGAT CGTGCCGATG
CTGTTCCACG CGGAATTCCC GGCCTGGATT GCCGGTCTGG CCTTCGGGGC GATCGCCATT
GGAGCGCTGG TGCCTGCGGC GATCATGTCG ATTGCCGCGG CCAACACCTT CACCCGGGAC
ATCTATCGGC CGTACTTCCG GCCGACCGCC TCCCCGGCTG AAGAGGCGTT GGTCAGCAAG
ATTGTGTCCT TGGTCGTCAA ACTCGGCGCC TTGCTCGTCA TCCTCTTCCT GAACGTCAGC
TTCGCGCTCG ACTTCCAGCT GATCGGCGGG ATCATCATTA TCCAGATCCT GCCGGCCGTC
GTCTTCGGGC TCTACACGCG GTGGTTCCAC CGCTGGGCGT TGATGGCCGG CTGGGTCGTC
GGCATGGTCT CGTCGCTCTG GATGCTCTGG CTGACACCGA AGGCGGGCGG ACACGGGCAC
TTCGGCGGGT CCCAGTGGGC GTTTACGCAT TGGGGCATCC ACACGAAGGT GACCATGTGG
ATCGGGTTGA TCACCTTAGT GTTCAACATC GTCGTCGCTG TCGTTCTCAC CCCGGTGTTG
TCGAAAGCCC CGCGCGGCCT CGACGCCACC CGCGACGAGG ACTACCTCGT GGCGGACGCC
TCCGAAGTGC GGGTGCCTGC CTGA
|
|---|
| Protein sequence | MKVPFNGTEF ALVVVLFVFV AVLGFLAARW QRGETLAHID EWGLGGRRFG TWVTWFLVGG
DLYTAYTFVA VPALVFGSGA LGFFAVPYTI VVYPIVMFAA ARMWSVARRH GFVTAADFVR
GRHGSHALAV ATALTGIVAT MPYIALQLAG IRAVIEAAGI NGDWPLWIAF AVLAAYTYSS
GLRAPALIAF VKDILIYAAV LAAVIWIPYK LHGYDHIFSA ANAHFAAAKS GGITLKDTQY
LAYSTLAFGS ALALFLYPHS VTGVLAAKSR DTVKKNMSLL PAYSLMLGFL ALLGYMAIAA
GVKPALGAGG KADTNTIVPM LFHAEFPAWI AGLAFGAIAI GALVPAAIMS IAAANTFTRD
IYRPYFRPTA SPAEEALVSK IVSLVVKLGA LLVILFLNVS FALDFQLIGG IIIIQILPAV
VFGLYTRWFH RWALMAGWVV GMVSSLWMLW LTPKAGGHGH FGGSQWAFTH WGIHTKVTMW
IGLITLVFNI VVAVVLTPVL SKAPRGLDAT RDEDYLVADA SEVRVPA
|
|---|
| |