Gene Acel_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1941 
Symbol 
ID4486360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2199421 
End bp2200659 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID639730732 
ProductFAD dependent oxidoreductase 
Protein accessionYP_873699 
Protein GI117929148 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG CGCAGGCGTC GGCGGACGTC GCCGTCATCG GCGGCGGGAT TGTCGGACTC 
GCGGCGGCCC GGGCCGTGCT CCAGCGGGAG CCGACGCTCT CGCTGGTGGT TCTTGAGAAG
GAAGAGCGTC TCGCGTGCCA CCAGAGCGGC CGCAACAGCG GCGTCGTTCA CGCGGGTGTC
TACTATGCCC CGGGTTCGTT GAAGGCGCGG TTCTGCACGG CGGGCCGGGC CGCGCTTGCC
GCATACACCG CCGAACGTCA CTTGCCGTAC GTGGAGTGCG GCAAAGTCGT GGTGGCGCTT
CGCGACGCCG AGATTCCGCG TCTTGAAGAG TTGTATCGAC GGTCGTGTGC CAACGGCGTC
CCTGACGTCC GCCTGATCGA CGCCGATGAG CTGCGGCGTA TCGAACCGAC GGCCCGCGGA
GTAGCCGCGT TGCACTCGCC GCGGACGGCG ATCACCGATT TTCCGGCGAT TGCCCGAAGT
TTTGCCGACG ACATCCGGGC CGCCGGCGGC CGGATAATGA CGGCTTTTCC CGTGCAGCAC
ATCGAGCAGC GCCAGGACAC CGTGGTTCTC ACCGGGAGAA ACGGGGATCG CGTTGTTGCG
GGTCGAGTGC TGATTTGCGC CGGCTTGTAT GGCGACCGGC TCGCCGTCAT GGCCGGAGAT
GCACCGGAGC CACGGATTGT TCCGTTCCGA GGCGACTATT ACCGATTGAC GCCTGAGTGG
CGCACTCGCG TGCGCGGGTT GATTTACCCG GTGCCGGATC CGGGTCTGCC TTTTCTCGGC
GTGCACATTA CGCCGACGGT CGGTGGAGAG CTGCTGGTCG GGCCGAACGC CGTCCTTGCC
ATGGCACGTG AGGGATACCG CGCCCGGACC GTGCGGCCGG ACGAGGTGCT CGATGCGATC
GGTTGGCCGG GATTCCTCCG GTTTGCCCGC AGGTATTGGC GGGTTGGTTG CGCGGAAATG
TGGCGGGCCG TCAGCCGACG CCGTTTTGCT GCCGACGTCG CCGCGTATCT GCCCGGTATT
ACGGCCCGGG ATCTGATCCG GGCACGGGCC GGAGTGCGTG CGCAAGCGAT GGACGCCGCC
GGTCGTCTGG TCGATGATTT CATCGTGCGT CGCGTCGGCA AGGTGGTCGC GGTGCGCAAT
GCGCCGTCTC CTGCCGCGAC GTCCAGCATC CCGATCGGCG AAGAGCTGGC CCGGCTGCTT
CTTTCGACGG ACGACGTACC AGCCGTGGAG TCACAATGA
 
Protein sequence
MSTAQASADV AVIGGGIVGL AAARAVLQRE PTLSLVVLEK EERLACHQSG RNSGVVHAGV 
YYAPGSLKAR FCTAGRAALA AYTAERHLPY VECGKVVVAL RDAEIPRLEE LYRRSCANGV
PDVRLIDADE LRRIEPTARG VAALHSPRTA ITDFPAIARS FADDIRAAGG RIMTAFPVQH
IEQRQDTVVL TGRNGDRVVA GRVLICAGLY GDRLAVMAGD APEPRIVPFR GDYYRLTPEW
RTRVRGLIYP VPDPGLPFLG VHITPTVGGE LLVGPNAVLA MAREGYRART VRPDEVLDAI
GWPGFLRFAR RYWRVGCAEM WRAVSRRRFA ADVAAYLPGI TARDLIRARA GVRAQAMDAA
GRLVDDFIVR RVGKVVAVRN APSPAATSSI PIGEELARLL LSTDDVPAVE SQ