Gene Acel_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1938 
Symbol 
ID4486357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2195694 
End bp2196887 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID639730729 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_873696 
Protein GI117929145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA CGGGCGGTGC GACCATCACC GGTCTGAACG CCTCGGACTC GGCGGCGCTC 
ATACCGGTGA TGAAGCCGTG GCTCGATGAG GCCGAGGCGC AGGCGGCCGC TGAGGTGGTC
CTCTCCGGCT GGGTGGCGCA GGGCCCGCGT GTTGCAGAGT TTGAACGCGC GGTCGCCCGA
CGGCTCGGGG CCGAGCACGG CATTGCGGTG TCATCCTGCA CGACAGGCTT GCACCTTGCG
TTGCTGGCGG CAGGAGTCGG CCCCGGTGAC GACGTCATCG TTCCCTCGTT ATCCTTTATC
GCCACGGCAA ATGCCGTCCG GTATTGCGGT GCGACACCAG TGTTCGCCGA CGTCGATCCG
GGCACGTTGA ATCTCACGCC TCAGACCATC GAGAGCGCCT GGACACCGCG GACTGTTGCC
GTCCTTCTTG TCCACCAGGC GGGAACACCG GCGGACGTCG ACGCTGTCGC CGCGTTATGT
GCCACGCGAG GAGCCGTCCT CATTGAAGAT GCCGCCTGTG CCATCGGTTC GACGTACCGC
GGGCGGCCGA TCGGAGCGCA TTCCGATCTC GCCGTACTCT CGTTTCATCC GCGGAAGATT
ATTACGACCG GCGAAGGGGG CATGATTCTC ACCAGCCGTG AGGATTTCGC CGTCCGCCTA
CGGCGTCTCC GTGAACACGC GATGAGTGTC TCGGCCGCGC AGCGCCATGA GCTCCGCCGG
CCCGTCCTGG AACGTTATCT CGAGCTCGGC TACAACTACC GGATGACCGA CGTCCAAGCC
GCTATCGGGC TCGCGCAACT TGAAAAGCTC GACGCCATCG TGGCACGCCG CCGTGAACGT
GCCAGCCGTT ACATTGCCGC CTTCGCCGAC ATGCCGGGTC TCCAAACCGT GGCCGACCCG
CCATATGGCA CGACGAACTT TCAGTCATTC TGGATTCTGC CCGACGGGCG TTACCACATT
TCGCAGGAGG AATTTCTGAG CCGACTGCTC GATGCCGGCA TATCTGCACG CCGAGGCATC
ATGGCGGCGC ATCGTGAACC GGCGTATGCG GGAATGGCGT CGCGCGCCCT ACCCGTGACC
GACACCGTGA CGACACGTTC CATCATCCTT CCGCTGTTTC ACGCGATGAC GGACGGTGAG
CAGGAGCGGG TCATCACCGC CGTCCGCGAC GTTCTCCGAG AGGCATGCCG ATGA
 
Protein sequence
MKHTGGATIT GLNASDSAAL IPVMKPWLDE AEAQAAAEVV LSGWVAQGPR VAEFERAVAR 
RLGAEHGIAV SSCTTGLHLA LLAAGVGPGD DVIVPSLSFI ATANAVRYCG ATPVFADVDP
GTLNLTPQTI ESAWTPRTVA VLLVHQAGTP ADVDAVAALC ATRGAVLIED AACAIGSTYR
GRPIGAHSDL AVLSFHPRKI ITTGEGGMIL TSREDFAVRL RRLREHAMSV SAAQRHELRR
PVLERYLELG YNYRMTDVQA AIGLAQLEKL DAIVARRRER ASRYIAAFAD MPGLQTVADP
PYGTTNFQSF WILPDGRYHI SQEEFLSRLL DAGISARRGI MAAHREPAYA GMASRALPVT
DTVTTRSIIL PLFHAMTDGE QERVITAVRD VLREACR