Gene Acel_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1759 
Symbol 
ID4485836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1991734 
End bp1994763 
Gene Length3030 bp 
Protein Length1009 aa 
Translation table11 
GC content65% 
IMG OID639730549 
Productpreprotein translocase subunit SecA 
Protein accessionYP_873517 
Protein GI117928966 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCAC TGCTTGACAA GCTGCTCCGT GCCGGTGAAG GCAAGATTCT GCGCAAGCTG 
AAGGCCATCG CCGAGCAGGT GAACTCGATC GAGGATGAGT TCGCCAAGCT CTCCGACGGC
GAGTTGCGCG GCCTGACGGA CGAATTCCGG GCACGCTACG CCGACGGCGA AAGCCTCGAC
GACCTGCTCC CCGAGGCATT CGCCGCGGTA CGGGAGGCGG CCAAGCGTAC CCTCGGGCAG
CGGCACTTCG ACGTCCAGAT CATGGGTGGG GCGGCCCTGC ACTTCGGCAA CATTGCCGAG
ATGAAGACCG GTGAGGGCAA GACCCTCGTC TCCACGCTCC CGGCATATCT CAACGCGCTT
GCGGGCCGCG GCGTCCACGT GGTGACGGTC AATGACTATC TGGCCCGCCG GGACGCGGAA
TGGATGGGGC GAATTCACCG CTTCCTCGGC CTAGAGGTTG GCGTCATTTC GCCGCAGATG
GGCCCTGCGG AACGCAAGAA GGCCTACGCG GCTGACATCA CCTACGGAAC CAACAACGAA
TTCGGCTTCG ACTATCTCCG GGACAACATG GCCTGGAGCG TCGATGAGAT TGTCCAACGG
GGGCACTTCT ACGCCATCGT CGACGAGGTT GACTCGATTC TCATCGACGA GGCCCGGACG
CCGCTCATCA TTTCCGGCCC CGTTGACATG AACCAGAAGT GGTACACCGA TTTCGCCAAG
CTCGCTGAGC GCTTGCAGCG CGGTGAGAAC GGCGAAGGCG ACTACGAGGT CGACGAGAAG
AAGCGCACGA TTTCGATTAC CGAACGCGGC GTGCAGCGGG TGGAGGACTG GCTCGGTATT
GACAATCTGT ATGAGCCGAC CAACACGCCG CTCGTCGGCT ACCTGCACAA CGCGTTGCGG
GCTAAAGAAC TGTACAAGCG GGATCGTGAT TACGTCGTCA TCGACGGCGA GGTCCTCATC
GTCGACGAGT TCACCGGGCG CATCCTGTAT GGACGTCGGT ACAACGAGGG AATGCACCAG
GCGATTGAAG CCAAGGAAGG CGTGCCGATC AAGCAGGAGA ATCAGACGCT CGCCACGATC
ACCTTGCAGA ATTACTTCCG GTTGTACGAG AAACTCGCCG GCATGACCGG GACGGCAATG
ACCGAGGCGA ACGAATTTCA TCAGATCTAC AAGCTCGGCG TCGTCCCGAT CCCGACGAAT
AGGCCGATGA TCCGGATTGA TCAACCGGAC GTCGTGTTCA AGACGGAGAA GGCTAAATTT
GCCGCTGTCG TCGAGGACAT TGCCCAGCGG CATGCCAAGG GCCAGCCGGT GCTCGTCGGT
ACGACGTCCG TGGAGAAATC CGAACTGTTG TCCGGAATGC TGTTGCGCCG CGGCATTCCG
CACGCCGTGC TGAACGCGAA GTATCACGAG AAGGAAGCGG CGATCGTCGC GCAGGCTGGT
CGTAAGGGCG CCGTGACCGT GGCCACCAAC ATGGCGGGCC GGGGCACGGA CATCATGCTC
GGCGGAAACC CCGAATTCCT TGCCCGCCAG GAGTTGGCGG AACGCGGGCT TTCTCCGGTC
GACACCCCCG AGGAATACGA GGCGGCCTGG CCGGAGGTGC TGGAGAAGTG GAAGAAGGCC
GTTGCGGCCG AACATGATGA AGTCGTCCAG CTGGGCGGCC TGTATGTCTT GGGAACCGAG
CGGCATGATT CGCGCCGTAT CGACAACCAG TTGCGCGGCC GGTCGGGCCG GCAGGGAGAT
CCGGGGGAGT CCCGGTTCTA CCTCTCTTTG GAAGACGACC TCATGCGGTT GTTCAACGGC
CCTATGGTGC AGCGCATCAT GGAGACGCTG AATTACCCGG AGGACGTCCC GCTGGAATCG
AAAATGGTCA CCCGCGCCAT TCGGTCCGCG CAGACGCAGG TCGAGCAGCA GAATTTCGAA
ATCCGCAAGA ACGTCTTGAA GTACGACGAA GTCTTGAACA AGCAGCGCGC CGTCATTTAC
GCCGAACGGC GTCGTGTCCT CCACGGCGAC GACCTGCACG AGCAGGTCGG CCACATGATT
GACGACGTCA TTCGCGACTA CGTCCGAGCG GCGACCGAGG AGGGATACGC CGAAGATTGG
GACCTCGAGC AGCTCTGGAC GGCGCTCCGC TCGTTGTACC CGGTCGGTCT GACGATCGAC
CAGGTGGTGG CCGAGTGCGG AGGCGACCGC AGCGGTCTCA CCGCGGAGTT CCTCATCGAA
CGCCTGACGG AGGATGCCCA CCGGGCGTAC GCAGAACGGG AGGCGGCGCT TGGGACGCTG
CCCGATGGTC AGCCCGTGAT ACGGGAGTTA GAACGCCGCG TCGTCCTCGC CGTGCTCGAC
CGCAAATGGC GTGAGCACCT CTACGAGATG GACTACCTGC AGGAGGGCAT CCAACTCCGC
TCGTACGGTC AGCGGGATCC TCTCGTCGAG TACCAGCGCG AGGGGTACAC GATGTTCCAA
ACCATGCTGG ACGGCATCAA GGAGGAATCG GTCCGCCTGC TGTTCAGCGT GGATGTTCAG
GTCACGCCCG TGGCGGAAGC TCCGGTCGCG GCGACGGCGG CGGCCGACGG CGCGGGAACC
GCCGCGGAGG GTACGGCCGG TGTCGCAGTA CCACAGCCGG CCGGTGCATC AGGGCCGGCA
CTGCAGCCGG TCCCCGCAGC GACGGCACCG GGGCAGCAGC CGGTCCCCGC GGCAGCCGCG
CTGTCGCCGG GTGCCGGGAT GCGGCTCGCG GACTCGCCGG TCGCCAAGTT GCTTGCCCCG
CCGCGTCCGA CCCGGTTGCA GTACACCGCG CCGACCATCG ACGGGGCGGC GGGGTCGGGA
GAGGCTACGG CGATGACCGT CGACGAGCGT CGTCCCTCAG GAGCGGCGGC ACGCGGTCCA
TCGCCGGCGT CCGCGTCGCG CCAGCGGGCG GGTGCCGGCG AACAGGCGCG CCCGCTCATG
TACGCCGGGA CGCCGCGAAG CGCCAAGTGC CCGTGTGGTT CCGGCAAACC GTACAAGCGG
TGCCACGGCG ACCCGCGAAA CGCGGGATGA
 
Protein sequence
MPALLDKLLR AGEGKILRKL KAIAEQVNSI EDEFAKLSDG ELRGLTDEFR ARYADGESLD 
DLLPEAFAAV REAAKRTLGQ RHFDVQIMGG AALHFGNIAE MKTGEGKTLV STLPAYLNAL
AGRGVHVVTV NDYLARRDAE WMGRIHRFLG LEVGVISPQM GPAERKKAYA ADITYGTNNE
FGFDYLRDNM AWSVDEIVQR GHFYAIVDEV DSILIDEART PLIISGPVDM NQKWYTDFAK
LAERLQRGEN GEGDYEVDEK KRTISITERG VQRVEDWLGI DNLYEPTNTP LVGYLHNALR
AKELYKRDRD YVVIDGEVLI VDEFTGRILY GRRYNEGMHQ AIEAKEGVPI KQENQTLATI
TLQNYFRLYE KLAGMTGTAM TEANEFHQIY KLGVVPIPTN RPMIRIDQPD VVFKTEKAKF
AAVVEDIAQR HAKGQPVLVG TTSVEKSELL SGMLLRRGIP HAVLNAKYHE KEAAIVAQAG
RKGAVTVATN MAGRGTDIML GGNPEFLARQ ELAERGLSPV DTPEEYEAAW PEVLEKWKKA
VAAEHDEVVQ LGGLYVLGTE RHDSRRIDNQ LRGRSGRQGD PGESRFYLSL EDDLMRLFNG
PMVQRIMETL NYPEDVPLES KMVTRAIRSA QTQVEQQNFE IRKNVLKYDE VLNKQRAVIY
AERRRVLHGD DLHEQVGHMI DDVIRDYVRA ATEEGYAEDW DLEQLWTALR SLYPVGLTID
QVVAECGGDR SGLTAEFLIE RLTEDAHRAY AEREAALGTL PDGQPVIREL ERRVVLAVLD
RKWREHLYEM DYLQEGIQLR SYGQRDPLVE YQREGYTMFQ TMLDGIKEES VRLLFSVDVQ
VTPVAEAPVA ATAAADGAGT AAEGTAGVAV PQPAGASGPA LQPVPAATAP GQQPVPAAAA
LSPGAGMRLA DSPVAKLLAP PRPTRLQYTA PTIDGAAGSG EATAMTVDER RPSGAAARGP
SPASASRQRA GAGEQARPLM YAGTPRSAKC PCGSGKPYKR CHGDPRNAG