| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1594 |
|---|
| Symbol | |
|---|
| ID | 4484647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1793309 |
|---|
| End bp | 1794880 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639730378 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_873352 |
|---|
| Protein GI | 117928801 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.437577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.697312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCCC CTCCACCGAA CGTCGACGTC CCGGCGCACG GACGGTCGGT CGGCGGCCGA
GCGGTTCGCG TCGTCCGGCG GATATTTGTG GGACCCCGCA CCCATCTCAC CCTCCGCGCG
CGGGTGAGTC TGCTTGTCGC CGTCGTCGTC GGCCTGGCCG TGGCGGTCAT CTCGTCGGTC
GCCTATGTGA CGGTGCGCGC GGAATTATTG CACCAACTGG ACGCGTCGCT GCGGTCCCGA
GCCGTCGCCG CAGCGGCCGT TCAGCTCGAT ACGGCCTCGA TTCTCGACCA GTCCACGTTG
GTTGTTCTCA CCGCGGAGAA CAAGGTATTC CTCGTGTCGG CGGACGGTGA TGTCATCGGC
AACATTCGCG ACCGGGATTT TGCCGTTCCG CTGGCCAACG GCCCGGAACT TGCGGTCGCA
CAAGGAAAAT TGGCCTGGTC TTTGCGCACG GTCACGGTGG ACGGCGTCGC GTACCGCATG
GTCGCCGTGC CGTCGGCGTC CGGGCAGGCG TTGGTTCTCG CCCGATCGAT GACAGAGACC
TCTGAAACCC TTGCCCGGCT CGGTTTCGTC CTGCTCGCCG TCGGGGTCGC CGGTATCGCC
GTCGCGGCCT TCAGCGGCTT GACCATTGCG CGGGCCGGTT TGCGCCCGGT GGAACGGTTG
ACGGCCGCCG CCGAACGTGT CGCGCGTACC GGCGACCTTA CGCCCATCGA CATCGACCGG
GACGACGAAA TCGGCCGGCT GGCGCAGAGT TTCAACGCCA TGCTGGTCGC GCTCGACCGG
TCCCAGCAGC TGCAGCGTCA ACTGGTGGCC GATGCCGGCC ATGAGCTCCG CACGCCGCTC
ACCAGCCTGC GGACCAATCT CGACTTGCTG GCACAGAGCG AAGCCGCCGG CGACCGCGGC
CTATCCCGAG AAGACCGCCT CGCCTTGTTG GCCGATGTGC GGGCGCAGGT CGAAGAACTC
TCCGGCTTGG TCGCCGATCT CGTCGAGCTG GCCCGGGACG ATGTGCCCGA CCAGCACCTG
GAGGAGATCG ATCTGGCGAC TGTCGCCGAG CGTGCCGTTG AGCGGGTGCG GCGTCGCGCG
TCCGGACTGC GGTTCGACAT TTCCCTGCAA CCGTGGCTGG TTTACGGTGA TCCGACGATG
CTCGAACGTG CGGTGACGAA CCTGCTCGAC AATGCGGTGA AGTGGAGCCC GCCCGGCGGC
CGGGTCGAAT TACGGTTGGA GAACGGCCGG CTCACCGTCA CCGACGAAGG GCCGGGCATC
TCCGACGTCG ACCTGCCGCA CATCTTCGAC CGGTTTTATC GCTCCGCCGA TGCCCGCAAG
ATGCCCGGCT CCGGGCTGGG TCTTGCGATC GTCCGGCACG CCGCACTCCG GCATGGCGGC
ACGATTCAGG CCGGCAAGGC GCCGTCGGGT GGCGCGTTGT TCGTGATGGA ATTACCCGGC
CGCCCGGTGT CGGCCGGTGA GGAGTACGCC GCGGACGCCG AGGAGTTCGC GGCCGAGCAG
CCGCCAGCGG AGCCGCCGCC GAAGCCGTCC CCAGCGATTT CCCAGGAAGA TAGGGGAGTG
TTACGACGAT GA
|
|---|
| Protein sequence | MIPPPPNVDV PAHGRSVGGR AVRVVRRIFV GPRTHLTLRA RVSLLVAVVV GLAVAVISSV
AYVTVRAELL HQLDASLRSR AVAAAAVQLD TASILDQSTL VVLTAENKVF LVSADGDVIG
NIRDRDFAVP LANGPELAVA QGKLAWSLRT VTVDGVAYRM VAVPSASGQA LVLARSMTET
SETLARLGFV LLAVGVAGIA VAAFSGLTIA RAGLRPVERL TAAAERVART GDLTPIDIDR
DDEIGRLAQS FNAMLVALDR SQQLQRQLVA DAGHELRTPL TSLRTNLDLL AQSEAAGDRG
LSREDRLALL ADVRAQVEEL SGLVADLVEL ARDDVPDQHL EEIDLATVAE RAVERVRRRA
SGLRFDISLQ PWLVYGDPTM LERAVTNLLD NAVKWSPPGG RVELRLENGR LTVTDEGPGI
SDVDLPHIFD RFYRSADARK MPGSGLGLAI VRHAALRHGG TIQAGKAPSG GALFVMELPG
RPVSAGEEYA ADAEEFAAEQ PPAEPPPKPS PAISQEDRGV LRR
|
|---|
| |